Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FTH1P6-201ENST00000430768 320 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 AL135790.2-201ENST00000437701 267 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 SNRPGP7-201ENST00000469016 106 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 AC020895.1-201ENST00000595362 272 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 AC006254.2-201ENST00000603259 279 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 AC096577.2-201ENST00000611455 153 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 AC013791.1-201ENST00000616619 62 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 AC099654.7-201ENST00000635788 2127 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 MFSD8-236ENST00000641509 4050 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 AC004925.1-201ENST00000624256 2706 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 SNORD37.2-201ENST00000391075 66 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 RN7SKP53-201ENST00000411337 315 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 AC006461.1-201ENST00000412637 326 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 AL357134.1-201ENST00000445848 426 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 AC091179.3-201ENST00000474761 144 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 SCARNA8-201ENST00000515924 131 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-436P-201ENST00000516171 114 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 RNA5SP76-201ENST00000516277 87 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-589P-201ENST00000516485 107 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 Y_RNA.712-201ENST00000517011 92 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 AC023043.3-201ENST00000593113 385 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 AC019159.1-201ENST00000605094 187 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 MIR7975-201ENST00000619350 68 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 MIR3674-201ENST00000636576 68 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 AF127577.6-201ENST00000623352 2191 ntBASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SHKBP1Q8TBC3 MTND5P32-201ENST00000560711 1802 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 Y_RNA.309-201ENST00000365046 111 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-147P-201ENST00000383983 107 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 SNORA9-201ENST00000384215 133 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-793P-201ENST00000384233 104 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 SNORA8.3-201ENST00000384679 139 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 Y_RNA.572-201ENST00000384757 98 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 MIR218-2-201ENST00000385006 110 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 PTMAP5-201ENST00000393073 333 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 RPL26P27-201ENST00000414397 437 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 AC096649.2-201ENST00000416186 393 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 AC074117.2-201ENST00000417130 397 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 FCF1P8-201ENST00000510322 597 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-453P-201ENST00000516819 85 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 RNU2-12P-201ENST00000517216 168 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 AC136628.3-201ENST00000521868 290 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 AP004242.1-201ENST00000533701 349 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 AC006065.5-201ENST00000623427 349 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 AC134026.1-201ENST00000623249 2239 ntBASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHKBP1Q8TBC3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 RNA5SP72-201ENST00000364442 117 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 SNORA22-201ENST00000383907 134 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 MIR544A-201ENST00000384855 91 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 U3.40-201ENST00000408706 208 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 AC078809.1-201ENST00000427601 140 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 AP004371.1-201ENST00000525240 214 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 AP001328.1-201ENST00000528550 176 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 CR383656.8-201ENST00000549046 145 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 AC090049.2-201ENST00000550377 109 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 AC021231.3-201ENST00000558497 370 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 AL391813.1-201ENST00000603098 260 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 AL137849.1-201ENST00000604767 169 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 U7.2-201ENST00000607576 63 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 AP002826.1-201ENST00000608835 315 ntBASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHKBP1Q8TBC3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms