Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC090517.3-201ENST00000625170 141 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 AL691447.3-201ENST00000635020 330 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AC062016.1-201ENST00000355719 319 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 RNY1P16-201ENST00000363063 111 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 SNORD115-32-201ENST00000364079 82 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-890P-201ENST00000384121 107 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-1304P-201ENST00000411374 106 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 RPS26P42-201ENST00000413485 326 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AL358453.1-201ENST00000422522 250 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AC003685.2-201ENST00000422795 395 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AC063976.3-201ENST00000426849 329 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 MTCO3P10-201ENST00000455912 772 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AC087477.1-201ENST00000465747 340 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 RPL17P19-201ENST00000489069 552 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AC021146.2-201ENST00000504736 556 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-586P-201ENST00000517265 104 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AC109329.2-201ENST00000519658 482 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AC079600.2-201ENST00000550076 130 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AL138963.2-201ENST00000605137 226 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AL050343.2-201ENST00000607338 280 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 RMST_6.1-201ENST00000611980 203 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AL359314.1-201ENST00000616913 261 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AL160413.1-201ENST00000622780 310 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 AC092608.2-201ENST00000624427 218 ntBASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
PRPF38AQ8NAV1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 snoU2_19.1-201ENST00000362361 80 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 MIR181B1-201ENST00000385240 110 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 HMGB3P2-201ENST00000411913 584 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 MTCYBP10-201ENST00000424905 650 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 AC108938.1-201ENST00000451204 136 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 snoU13.30-201ENST00000458951 104 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 RNU7-26P-201ENST00000458980 63 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 RN7SKP43-201ENST00000516173 320 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 RPPH1-2P-201ENST00000516688 293 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-1198P-201ENST00000516904 67 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 AC104581.2-201ENST00000572227 430 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 AC080078.3-201ENST00000605407 463 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 AC005014.2-201ENST00000607795 599 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 AC005520.5-201ENST00000613926 164 ntBASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PRPF38AQ8NAV1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
PRPF38AQ8NAV1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 AC135776.4-201ENST00000624300 1904 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 RNU6-1040P-201ENST00000383974 107 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 SNORA36A-201ENST00000384221 132 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 RNU6-1072P-201ENST00000384703 107 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 RNU6-443P-201ENST00000384780 107 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 AF228730.4-201ENST00000421457 183 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 AL161788.1-201ENST00000441805 169 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 RPL39P40-201ENST00000445481 146 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 AL109933.2-201ENST00000452651 260 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 GSTA11P-201ENST00000452866 669 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 AC023043.3-201ENST00000593113 385 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 AL078605.1-201ENST00000603529 500 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.27□□□□□ -1.89
PRPF38AQ8NAV1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 Y_RNA.48-201ENST00000362710 103 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 RNU6-490P-201ENST00000362985 107 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 MIR153-2-201ENST00000385225 87 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 MIR208B-201ENST00000401172 77 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 AC007098.1-201ENST00000420122 367 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 OR2AQ1P-201ENST00000451972 200 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 AP004217.1-201ENST00000480579 346 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 AF186996.7-201ENST00000492781 209 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 AC145146.1-201ENST00000496370 254 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 AC022493.2-201ENST00000506122 481 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 RNU6-470P-201ENST00000515954 104 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 CBX3P7-201ENST00000532876 502 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 AC100812.1-201ENST00000607622 580 ntBASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PRPF38AQ8NAV1 RNU4-15P-201ENST00000362613 141 ntBASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 MIR9-1-201ENST00000385198 89 ntBASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 AL353997.1-201ENST00000432936 108 ntBASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.25□□□□□ -1.89
PRPF38AQ8NAV1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms