Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MTND4P1-201ENST00000457501 1466 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 Y_RNA.665-201ENST00000516177 98 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 RNA5SP200-201ENST00000516360 103 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 RNU6-1332P-201ENST00000516666 104 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 SUMO2P18-201ENST00000518873 252 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AC109635.3-201ENST00000529536 185 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AC021269.2-201ENST00000532318 330 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 GNAI2P1-201ENST00000541815 315 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AP002770.2-201ENST00000543613 532 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AC103810.8-201ENST00000607347 118 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AL133215.3-201ENST00000609801 448 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AL442067.2-201ENST00000614033 363 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AC098657.3-201ENST00000620434 263 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 uc_338.20-201ENST00000621563 178 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 MIR6132-201ENST00000622083 109 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AL137790.1-201ENST00000634283 177 ntBASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
LINC01561Q8N1V8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.53□□□□□ -2.17
LINC01561Q8N1V8 MIR340-201ENST00000362125 95 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 Y_RNA.123-201ENST00000363338 102 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 Y_RNA.256-201ENST00000364594 104 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 RNA5SP100-201ENST00000410903 110 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 RNA5SP59-201ENST00000410922 110 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 RNA5SP489-201ENST00000410986 109 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 RNA5SP184-201ENST00000411071 108 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 MTCO3P46-201ENST00000425787 232 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 RPS15AP28-201ENST00000435088 386 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 MTCO1P44-201ENST00000441935 243 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AL513124.1-201ENST00000450410 614 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 OR2AQ1P-201ENST00000451972 200 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 RNA5SP57-201ENST00000459463 123 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC007215.1-201ENST00000464893 276 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AL049873.1-201ENST00000480540 376 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC083904.1-201ENST00000487828 231 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC234781.5-201ENST00000508429 271 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC096745.1-201ENST00000509945 370 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AK6P1-201ENST00000540219 478 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 SUB1P4-201ENST00000566062 339 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 EIF1P4-201ENST00000572664 335 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC104458.1-201ENST00000608243 463 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AC005562.2-201ENST00000618264 111 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01561Q8N1V8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 RNU6-661P-201ENST00000362409 107 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 Y_RNA.132-201ENST00000363421 102 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 Y_RNA.402-201ENST00000383972 102 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 MIR196B-201ENST00000384852 84 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 RNU6-780P-201ENST00000391030 104 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 SNORA48.7-201ENST00000391302 135 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 MIR320B2-201ENST00000408479 138 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 RNU2-40P-201ENST00000410833 196 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 AC139712.2-201ENST00000424302 339 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 USP9YP28-201ENST00000435142 589 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 DAP3P1-201ENST00000441522 278 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 SNRPEP8-201ENST00000442866 260 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 AC025033.1-201ENST00000463883 194 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 AC130509.1-201ENST00000464158 433 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 AC027575.1-201ENST00000481064 460 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 RNVU1-2-201ENST00000516326 135 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 RNU6-314P-201ENST00000516574 104 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 RNU1-40P-201ENST00000516816 164 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 Y_RNA.704-201ENST00000516851 102 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 RNU1-97P-201ENST00000516872 164 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 MTND1P5-201ENST00000517906 940 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 GTF3AP2-201ENST00000557014 266 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 TCL6_2.1-201ENST00000615162 119 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 CTSLP2-204ENST00000629029 392 ntBASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC01561Q8N1V8 MTND4P5-201ENST00000435821 1374 ntBASIC1.5□□□□□ -2.17
LINC01561Q8N1V8 Y_RNA.9-201ENST00000362354 101 ntBASIC1.5□□□□□ -2.17
LINC01561Q8N1V8 RNA5SP68-201ENST00000363885 119 ntBASIC1.5□□□□□ -2.17
LINC01561Q8N1V8 Y_RNA.436-201ENST00000384097 102 ntBASIC1.5□□□□□ -2.17
LINC01561Q8N1V8 SNORA67.4-201ENST00000384688 142 ntBASIC1.5□□□□□ -2.17
LINC01561Q8N1V8 SNORA11.4-201ENST00000408823 129 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms