Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 MIR367-201ENST00000362299 68 ntBASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 SNORA25.7-201ENST00000364375 127 ntBASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 AL606845.1-201ENST00000404881 255 ntBASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 AC069285.2-201ENST00000440210 275 ntBASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 AC021739.1-201ENST00000559631 174 ntBASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 AL136164.4-201ENST00000625013 2135 ntBASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 AC007496.3-201ENST00000624987 3443 ntBASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 Y_RNA.251-201ENST00000364551 99 ntBASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 AL691449.1-201ENST00000426570 421 ntBASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 TOMM22P2-201ENST00000430735 237 ntBASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 RNU6-344P-201ENST00000516635 111 ntBASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 AC025281.1-201ENST00000567026 265 ntBASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 MIR4727-201ENST00000622232 55 ntBASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 AL773545.4-201ENST00000637262 310 ntBASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 AL513478.4-201ENST00000641636 310 ntBASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SH3RF1Q7Z6J0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 RNU6-50P-201ENST00000362356 103 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 RNU6-144P-201ENST00000383951 107 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 RNU6-768P-201ENST00000384683 107 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 CYCSP48-201ENST00000417124 323 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AL365496.1-201ENST00000426885 215 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AC084357.1-201ENST00000473404 255 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 RPS29P2-201ENST00000479278 136 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AC078817.1-201ENST00000492623 435 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 RNU1-117P-201ENST00000517041 158 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AC026403.1-201ENST00000518938 295 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AC068700.1-201ENST00000565862 3754 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AC108081.1-201ENST00000604358 221 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AL034555.1-201ENST00000604816 211 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AC068205.3-201ENST00000636385 468 ntBASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.59□□□□□ -1.67
SH3RF1Q7Z6J0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
SH3RF1Q7Z6J0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 RNY1P11-201ENST00000363759 113 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 Y_RNA.229-201ENST00000364347 113 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 RNU6-915P-201ENST00000364943 103 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 Y_RNA.393-201ENST00000383936 102 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 RNU6-32P-201ENST00000383948 107 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 RNU6-13P-201ENST00000384248 107 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 RNU6-12P-201ENST00000384604 107 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 U8.11-201ENST00000384699 133 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 U8.12-201ENST00000384701 133 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 RNU6-41P-201ENST00000384741 107 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 MIR30B-201ENST00000384850 88 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 MT-TT-201ENST00000387460 66 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 SNORA12.1-201ENST00000390873 148 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 SNORA75.5-201ENST00000391291 81 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 RNU6-588P-201ENST00000410281 105 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 Z75741.1-201ENST00000446793 314 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 U8.18-201ENST00000459285 133 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 RNU7-141P-201ENST00000459304 62 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 Y_RNA.651-201ENST00000459380 103 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 AC107626.1-201ENST00000471084 183 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 AC023141.12-201ENST00000512399 199 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 RNU5F-2P-201ENST00000516066 82 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 SNORA70.12-201ENST00000516084 153 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 SNORA70.24-201ENST00000517233 118 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 AC006199.1-201ENST00000548728 219 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 AC005562.2-201ENST00000618264 111 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 MIR3199-2-201ENST00000636243 86 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 AL161912.2-201ENST00000565707 3007 ntBASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF1Q7Z6J0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SH3RF1Q7Z6J0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.57□□□□□ -1.68
SH3RF1Q7Z6J0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.57□□□□□ -1.68
SH3RF1Q7Z6J0 ZNF702P-202ENST00000434269 1966 ntBASIC4.57□□□□□ -1.68
SH3RF1Q7Z6J0 AC018555.1-201ENST00000567548 1980 ntBASIC4.57□□□□□ -1.68
SH3RF1Q7Z6J0 Y_RNA.243-201ENST00000364481 109 ntBASIC4.57□□□□□ -1.68
SH3RF1Q7Z6J0 SNORD87-201ENST00000364849 89 ntBASIC4.57□□□□□ -1.68
SH3RF1Q7Z6J0 RNA5SP167-201ENST00000365461 116 ntBASIC4.57□□□□□ -1.68
SH3RF1Q7Z6J0 U1.1-201ENST00000384101 164 ntBASIC4.57□□□□□ -1.68
SH3RF1Q7Z6J0 PTMAP5-201ENST00000393073 333 ntBASIC4.57□□□□□ -1.68
SH3RF1Q7Z6J0 RNY4P30-201ENST00000410216 95 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms