Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL442163.3-201ENST00000554110 156 ntBASIC2.81□□□□□ -1.96
PTCHD4Q6ZW05 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.81□□□□□ -1.96
PTCHD4Q6ZW05 AL390123.1-201ENST00000603216 237 ntBASIC2.81□□□□□ -1.96
PTCHD4Q6ZW05 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.81□□□□□ -1.96
PTCHD4Q6ZW05 AC137590.2-201ENST00000619709 240 ntBASIC2.81□□□□□ -1.96
PTCHD4Q6ZW05 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
PTCHD4Q6ZW05 Z75746.1-201ENST00000440243 2080 ntBASIC2.81□□□□□ -1.96
PTCHD4Q6ZW05 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
PTCHD4Q6ZW05 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.81□□□□□ -1.96
PTCHD4Q6ZW05 AL109809.4-201ENST00000603520 2185 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 Y_RNA.152-201ENST00000363578 100 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 Y_RNA.176-201ENST00000363815 109 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 RNU4-50P-201ENST00000364361 141 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 Y_RNA.319-201ENST00000365138 92 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 SNORA63.7-201ENST00000365579 123 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 Y_RNA.551-201ENST00000384661 102 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 Y_RNA.574-201ENST00000384766 95 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 AL357075.1-201ENST00000404107 726 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 Z98742.2-201ENST00000431564 187 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 AC027288.2-201ENST00000553028 243 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 MIR4503-201ENST00000582187 83 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 AL020997.2-201ENST00000602607 184 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 PRR13P7-201ENST00000605538 430 ntBASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PTCHD4Q6ZW05 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 Y_RNA.27-201ENST00000362540 103 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 RNU6-1159P-201ENST00000362933 107 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 SNORA62.3-201ENST00000365110 153 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 Y_RNA.471-201ENST00000384312 102 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 MIR200C-201ENST00000384980 68 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 MIR186-201ENST00000384988 86 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 RNU6-1109P-201ENST00000391187 107 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 RNA5SP344-201ENST00000411081 104 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 AL139281.1-201ENST00000422120 335 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 AL445305.1-201ENST00000432577 575 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 Z75741.1-201ENST00000446793 314 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 snoU13.14-201ENST00000459372 104 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 AC006445.1-201ENST00000491925 405 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 HMGB1P35-201ENST00000503360 598 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 SCARNA17.1-201ENST00000516211 143 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 RNU6-397P-201ENST00000516226 104 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 SCARNA17.2-201ENST00000516334 143 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 MIR2355-201ENST00000517199 87 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 AP002404.1-201ENST00000532005 451 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 AP002770.2-201ENST00000543613 532 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 AC090517.1-201ENST00000569307 266 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 MIR3136-201ENST00000583498 78 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 AC073410.2-201ENST00000603240 332 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 RAC1P9-201ENST00000604990 392 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 SCARNA17.4-201ENST00000614296 143 ntBASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PTCHD4Q6ZW05 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 RNU1-76P-201ENST00000362903 159 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 RNU1-57P-201ENST00000384491 166 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 Y_RNA.512-201ENST00000384518 102 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AIMP1P2-201ENST00000425294 312 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 EIF1P2-201ENST00000428233 350 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 RPS15AP7-201ENST00000439294 405 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AC010469.2-201ENST00000496412 480 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 RNU6-1114P-201ENST00000516022 107 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 RNU6-567P-201ENST00000516746 107 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AC034114.1-201ENST00000520293 285 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AC079598.5-201ENST00000547460 117 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 UBL5P4-201ENST00000562584 236 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AC090616.3-201ENST00000582184 217 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 MIR3158-1-201ENST00000583596 81 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AC011471.1-201ENST00000585766 187 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 AL034555.1-201ENST00000604816 211 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 U6.105-201ENST00000637379 88 ntBASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PTCHD4Q6ZW05 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PTCHD4Q6ZW05 RNU6-1301P-201ENST00000362724 104 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms