Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU4-15P-201ENST00000362613 141 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-653P-201ENST00000363074 106 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 Y_RNA.304-201ENST00000365011 112 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 Y_RNA.329-201ENST00000365209 107 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNA5SP240-201ENST00000365355 128 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 Y_RNA.398-201ENST00000383952 99 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 MIR548I2-201ENST00000408348 149 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-1135P-201ENST00000411083 103 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC096649.2-201ENST00000416186 393 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 AIMP1P2-201ENST00000425294 312 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 BTF3P11-201ENST00000426582 477 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL445584.1-201ENST00000431451 330 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNA5SP309-201ENST00000516670 106 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC084757.4-201ENST00000616350 526 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC007496.3-201ENST00000624987 3443 ntBASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1Q5Y7H0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 SNORD114-19-201ENST00000363072 75 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-454P-201ENST00000364292 107 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 SNORD87-201ENST00000364849 89 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNY1P5-201ENST00000383890 115 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 MIR147B-201ENST00000390185 80 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNA5SP201-201ENST00000410316 124 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNA5SP38-201ENST00000410750 119 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC004866.1-201ENST00000411748 78 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL035423.1-201ENST00000420331 213 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC027124.2-201ENST00000428249 105 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 HMGN2P20-201ENST00000437531 273 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 TMSB4XP3-201ENST00000445144 114 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL441985.1-201ENST00000457727 251 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU7-23P-201ENST00000459465 62 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RPL23AP70-201ENST00000483361 460 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RN7SKP18-201ENST00000516005 275 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RN7SKP83-201ENST00000516512 178 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNA5SP143-201ENST00000516936 115 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC011471.1-201ENST00000585766 187 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-91P-201ENST00000607774 107 ntBASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1Q5Y7H0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DQA1Q5Y7H0 Y_RNA.435-201ENST00000384095 112 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 MIR3074-201ENST00000384885 81 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 MIR200C-201ENST00000384980 68 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 HMGN2P8-201ENST00000391458 268 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL357139.1-201ENST00000407792 426 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 RN7SL542P-201ENST00000467147 294 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL360157.1-201ENST00000565962 87 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC006130.2-201ENST00000586202 326 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC020914.4-201ENST00000597690 277 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 CR392039.5-201ENST00000623201 510 ntBASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DQA1Q5Y7H0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU6-1272P-201ENST00000362776 107 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU6-324P-201ENST00000363957 106 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU1-89P-201ENST00000384592 164 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 U8.11-201ENST00000384699 133 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 U8.12-201ENST00000384701 133 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 MIR134-201ENST00000385258 73 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU6-750P-201ENST00000390946 107 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNA5SP252-201ENST00000391131 119 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms