Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.86□□□□□ -1.95
RNF220Q5VTB9 AC018630.3-201ENST00000542637 96 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 AC107016.2-201ENST00000547968 190 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.86□□□□□ -1.95
RNF220Q5VTB9 AC074050.1-201ENST00000563247 211 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 AL356575.1-201ENST00000603008 283 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 MIR622-201ENST00000638396 96 ntBASIC2.86□□□□□ -1.95
RNF220Q5VTB9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.86□□□□□ -1.95
RNF220Q5VTB9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF220Q5VTB9 MIR561-201ENST00000385216 97 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 MIR320B2-201ENST00000408479 138 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 RNA5SP274-201ENST00000410484 108 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 RNA5SP492-201ENST00000411330 114 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 AL354751.2-201ENST00000415471 210 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 AC005326.1-201ENST00000429197 123 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF220Q5VTB9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF220Q5VTB9 SNORA84-201ENST00000459229 133 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.631-201ENST00000459607 101 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 RN7SL20P-201ENST00000488827 297 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 HSPE1P20-201ENST00000538133 289 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 AC027288.2-201ENST00000553028 243 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF220Q5VTB9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF220Q5VTB9 AC018692.3-201ENST00000623929 123 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 AL035425.3-201ENST00000564206 4996 ntBASIC2.85□□□□□ -1.95
RNF220Q5VTB9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RNF220Q5VTB9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.138-201ENST00000363462 102 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 RNU6-546P-201ENST00000383991 107 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 SNORD15B-201ENST00000384714 146 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 MIR487A-201ENST00000385009 80 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 SNORA69.1-201ENST00000390904 137 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 UBA52P6-201ENST00000399822 382 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AL139095.1-201ENST00000404326 391 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 MIR1302-11-201ENST00000408051 138 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 MIR1302-9-201ENST00000408365 138 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 MIR1302-10-201ENST00000408734 138 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AL035666.1-201ENST00000446195 348 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 RNU7-87P-201ENST00000459343 62 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AC132942.1-201ENST00000486753 483 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 ANXA2P1-201ENST00000505539 926 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 SLC25A15P5-201ENST00000508033 253 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF220Q5VTB9 SCARNA13-201ENST00000516672 275 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AC026470.2-201ENST00000561492 181 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AC090517.1-201ENST00000569307 266 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.84□□□□□ -1.95
RNF220Q5VTB9 MIR3670-2-201ENST00000582974 65 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 MIR3670-1-201ENST00000584160 65 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 MIR3670-3-201ENST00000584855 65 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AC008739.3-201ENST00000603262 127 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AC016727.2-201ENST00000603988 621 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 SNRPGP20-201ENST00000604477 205 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 RPL17P51-201ENST00000605218 238 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 MIR1302-2-201ENST00000607096 138 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 MIR92B-201ENST00000607575 96 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 MIR3670-4-201ENST00000612260 65 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 AC091925.1-201ENST00000623204 462 ntBASIC2.84□□□□□ -1.95
RNF220Q5VTB9 Z82209.1-201ENST00000422141 2135 ntBASIC2.84□□□□□ -1.96
RNF220Q5VTB9 BX322639.1-202ENST00000423987 2213 ntBASIC2.84□□□□□ -1.96
RNF220Q5VTB9 AC135776.4-201ENST00000624300 1904 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF220Q5VTB9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.83□□□□□ -1.96
RNF220Q5VTB9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF220Q5VTB9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.83□□□□□ -1.96
RNF220Q5VTB9 MTND5P16-201ENST00000460269 1703 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 AC073325.2-201ENST00000339545 159 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 RNU6-874P-201ENST00000362390 105 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 RNU6-26P-201ENST00000383985 107 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 RNU6-474P-201ENST00000384243 107 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RNF220Q5VTB9 RNU2-32P-201ENST00000411193 191 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 HMGN2P35-201ENST00000412164 270 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 USP9YP16-201ENST00000430287 407 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 AC005534.2-201ENST00000431047 433 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 AC112220.1-201ENST00000434628 355 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 AC006028.1-201ENST00000438379 402 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF220Q5VTB9 USP9YP23-201ENST00000455085 407 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 AP000870.1-201ENST00000472927 406 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 AC103975.1-201ENST00000482506 483 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 RPL21P129-201ENST00000491732 478 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF220Q5VTB9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF220Q5VTB9 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 RNU6-1153P-201ENST00000516760 105 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 AC023442.1-201ENST00000531247 422 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF220Q5VTB9 CBX3P7-201ENST00000532876 502 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 U4atac.1-201ENST00000618345 95 ntBASIC2.83□□□□□ -1.96
RNF220Q5VTB9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.83□□□□□ -1.96
RNF220Q5VTB9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF220Q5VTB9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms