Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 AC146507.2-201ENST00000460608 476 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 AC117440.1-201ENST00000474107 571 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LSM12Q3MHD2 AC106707.2-201ENST00000484182 374 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 AC104619.4-201ENST00000510773 249 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 RNU6-1073P-201ENST00000517182 106 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 AL391261.3-201ENST00000557194 520 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 MIR3921-201ENST00000577308 85 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 SNORD84-203ENST00000584275 78 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 AC005828.6-201ENST00000606610 232 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 AL121772.2-201ENST00000614331 297 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 AC073349.3-201ENST00000617616 186 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM12Q3MHD2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM12Q3MHD2 AC093908.1-201ENST00000623125 8092 ntBASIC3.2□□□□□ -1.9
LSM12Q3MHD2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM12Q3MHD2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AL359693.1-201ENST00000614959 2407 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 SNORD32A-201ENST00000364805 84 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 SNORA5A-201ENST00000384111 134 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 RNU6-1181P-201ENST00000384191 106 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 RNU6-1145P-201ENST00000384246 107 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 MIR518D-201ENST00000385014 87 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 RNU2-68P-201ENST00000410878 191 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 RPL32P35-201ENST00000415214 394 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AL356867.1-201ENST00000429623 299 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AL445584.1-201ENST00000431451 330 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 IFNA11P-201ENST00000446352 526 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AC010285.1-201ENST00000470580 392 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 RNU6-479P-201ENST00000516348 105 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AC055872.1-201ENST00000570978 278 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AC024153.1-201ENST00000603103 365 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AC005296.1-201ENST00000616145 209 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 SCARNA4-202ENST00000625402 129 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 AC009093.8-201ENST00000641769 292 ntBASIC3.19□□□□□ -1.9
LSM12Q3MHD2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM12Q3MHD2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AF117829.1-206ENST00000621883 3802 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 RNU5B-2P-201ENST00000363036 113 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 RNU6-653P-201ENST00000363074 106 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 RNU6-527P-201ENST00000363425 104 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 Y_RNA.272-201ENST00000364696 102 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 RNU6-818P-201ENST00000364837 108 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 RNA5SP479-201ENST00000364858 117 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 SNORA22C-201ENST00000384614 134 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 SNORD17-201ENST00000390930 237 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 Y_RNA.580-201ENST00000391004 95 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 U3.37-201ENST00000408528 213 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 RNA5SP229-201ENST00000410809 99 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AC007395.1-201ENST00000451333 677 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 RBMY2UP-201ENST00000453474 324 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AC025518.1-201ENST00000479856 347 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AC140059.1-201ENST00000489238 361 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 SNORA40.9-201ENST00000515895 93 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 SNORA70.16-201ENST00000516390 95 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 RNU6-703P-201ENST00000516946 107 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 IGKV2-26-201ENST00000518305 343 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 MIR5695-201ENST00000579717 85 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AC004832.5-201ENST00000608677 401 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AL357075.2-201ENST00000614906 189 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AC027309.3-201ENST00000623419 351 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 AC004925.1-201ENST00000624256 2706 ntBASIC3.18□□□□□ -1.9
LSM12Q3MHD2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM12Q3MHD2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LSM12Q3MHD2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.17□□□□□ -1.9
LSM12Q3MHD2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSM12Q3MHD2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.17□□□□□ -1.9
LSM12Q3MHD2 RNU6-741P-201ENST00000383889 107 ntBASIC3.17□□□□□ -1.9
LSM12Q3MHD2 SNORD116-18-201ENST00000383961 92 ntBASIC3.17□□□□□ -1.9
LSM12Q3MHD2 RNU6-514P-201ENST00000384208 107 ntBASIC3.17□□□□□ -1.9
LSM12Q3MHD2 RNU6-159P-201ENST00000391080 106 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms