Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.41□□□□□ -1.7
NR1H3Q13133 AL391813.1-201ENST00000603098 260 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 AL391261.4-201ENST00000616012 481 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 AL138880.2-201ENST00000616214 239 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.41□□□□□ -1.7
NR1H3Q13133 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H3Q13133 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H3Q13133 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H3Q13133 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NR1H3Q13133 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NR1H3Q13133 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
NR1H3Q13133 AC002546.1-201ENST00000588041 2504 ntBASIC4.4□□□□□ -1.7
NR1H3Q13133 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NR1H3Q13133 snoU2_19.1-201ENST00000362361 80 ntBASIC4.4□□□□□ -1.71
NR1H3Q13133 Y_RNA.310-201ENST00000365063 113 ntBASIC4.4□□□□□ -1.71
NR1H3Q13133 SNORA67.2-201ENST00000384300 149 ntBASIC4.4□□□□□ -1.71
NR1H3Q13133 MIR526A2-201ENST00000390198 65 ntBASIC4.4□□□□□ -1.71
NR1H3Q13133 AL356095.1-201ENST00000417217 199 ntBASIC4.4□□□□□ -1.71
NR1H3Q13133 MTND4LP9-201ENST00000427694 174 ntBASIC4.4□□□□□ -1.71
NR1H3Q13133 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.4□□□□□ -1.71
NR1H3Q13133 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.4□□□□□ -1.71
NR1H3Q13133 MIR3658-201ENST00000636291 56 ntBASIC4.4□□□□□ -1.71
NR1H3Q13133 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.4□□□□□ -1.71
NR1H3Q13133 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
NR1H3Q13133 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H3Q13133 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H3Q13133 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H3Q13133 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NR1H3Q13133 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NR1H3Q13133 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NR1H3Q13133 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.39□□□□□ -1.71
NR1H3Q13133 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NR1H3Q13133 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NR1H3Q13133 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.39□□□□□ -1.71
NR1H3Q13133 RNA5SP513-201ENST00000364648 118 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 RNA5SP205-201ENST00000364653 136 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NR1H3Q13133 SNORD66.1-201ENST00000391230 76 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 RNA5SP306-201ENST00000411087 107 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 AC006461.1-201ENST00000412637 326 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.39□□□□□ -1.71
NR1H3Q13133 AL117339.2-201ENST00000430475 180 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 AL121914.1-201ENST00000450188 156 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 AC245047.8-201ENST00000456455 284 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 RNU7-141P-201ENST00000459304 62 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 RNU6-453P-201ENST00000516819 85 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 RNU6-971P-201ENST00000516920 106 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.39□□□□□ -1.71
NR1H3Q13133 GNRHR2P1-201ENST00000555315 631 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.39□□□□□ -1.71
NR1H3Q13133 RN7SL600P-201ENST00000581811 299 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 MIR6867-201ENST00000610636 67 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 AL391903.3-201ENST00000612158 163 ntBASIC4.39□□□□□ -1.71
NR1H3Q13133 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
NR1H3Q13133 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NR1H3Q13133 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.39□□□□□ -1.71
NR1H3Q13133 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.39□□□□□ -1.71
NR1H3Q13133 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
NR1H3Q13133 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.39□□□□□ -1.71
NR1H3Q13133 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NR1H3Q13133 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NR1H3Q13133 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.38□□□□□ -1.71
NR1H3Q13133 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NR1H3Q13133 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.38□□□□□ -1.71
NR1H3Q13133 AC018555.1-201ENST00000567548 1980 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NR1H3Q13133 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.38□□□□□ -1.71
NR1H3Q13133 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NR1H3Q13133 RNA5SP283-201ENST00000365604 119 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 MIR548B-201ENST00000385247 97 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 MIR134-201ENST00000385258 73 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 AL445584.1-201ENST00000431451 330 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.38□□□□□ -1.71
NR1H3Q13133 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.38□□□□□ -1.71
NR1H3Q13133 AL162151.2-201ENST00000448875 158 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 RPL23AP62-201ENST00000463396 453 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 RPL36AP48-201ENST00000485521 314 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 RPL21P129-201ENST00000491732 478 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 AC025554.1-201ENST00000505641 188 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 SCARNA8-201ENST00000515924 131 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 AC090877.1-201ENST00000561418 344 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 MIR5688-201ENST00000580619 83 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 AL359881.1-201ENST00000602916 267 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NR1H3Q13133 MAPK10-373ENST00000641983 6772 ntBASIC4.38□□□□□ -1.71
NR1H3Q13133 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.38□□□□□ -1.71
NR1H3Q13133 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.38□□□□□ -1.71
NR1H3Q13133 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
NR1H3Q13133 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NR1H3Q13133 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NR1H3Q13133 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H3Q13133 RNU6-1305P-201ENST00000364353 104 ntBASIC4.37□□□□□ -1.71
NR1H3Q13133 Y_RNA.261-201ENST00000364631 102 ntBASIC4.37□□□□□ -1.71
NR1H3Q13133 SNORA20-201ENST00000384662 132 ntBASIC4.37□□□□□ -1.71
NR1H3Q13133 SNORD37.2-201ENST00000391075 66 ntBASIC4.37□□□□□ -1.71
NR1H3Q13133 RN7SKP202-201ENST00000410439 330 ntBASIC4.37□□□□□ -1.71
NR1H3Q13133 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.37□□□□□ -1.71
NR1H3Q13133 RPL17P51-201ENST00000605218 238 ntBASIC4.37□□□□□ -1.71
NR1H3Q13133 AC025754.2-201ENST00000606491 432 ntBASIC4.37□□□□□ -1.71
NR1H3Q13133 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms