Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AL353752.1-201ENST00000454946 260 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 RNU7-63P-201ENST00000459054 62 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 RNU7-180P-201ENST00000459240 63 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 RNU6-377P-201ENST00000515965 102 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AL137161.1-201ENST00000532231 390 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC023050.3-201ENST00000541142 333 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 MTCO3P23-201ENST00000561363 289 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC012507.3-201ENST00000603556 477 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC017083.3-201ENST00000609955 700 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AL359314.1-201ENST00000616913 261 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 AC068792.1-201ENST00000621354 417 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TNFRSF9Q07011 MTND4P14-201ENST00000435799 1354 ntBASIC1.18□□□□□ -2.22
TNFRSF9Q07011 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 MIR337-201ENST00000362281 93 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 RNU6-212P-201ENST00000362642 104 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 RNU6-105P-201ENST00000363909 104 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 RNU4-75P-201ENST00000364621 146 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 MIR1323-201ENST00000408090 73 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC016907.1-201ENST00000419483 435 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 RPL39P29-201ENST00000447779 157 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC245102.2-201ENST00000448956 180 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AL122001.1-201ENST00000457027 370 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AL121594.1-201ENST00000475906 575 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC099513.1-201ENST00000490423 301 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 MTND2P33-201ENST00000506452 1031 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 CCDC34P1-201ENST00000507441 517 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AP005597.4-201ENST00000526762 229 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC015720.1-201ENST00000565251 277 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC103987.3-201ENST00000582071 292 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC078795.2-201ENST00000602835 1252 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 HULC.1-201ENST00000612720 240 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AL158209.2-201ENST00000619266 216 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AL159153.1-201ENST00000619688 317 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC048344.4-201ENST00000619744 527 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.17□□□□□ -2.22
TNFRSF9Q07011 AC139792.3-201ENST00000623525 224 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 MIR6863-201ENST00000636112 90 ntBASIC1.17□□□□□ -2.22
TNFRSF9Q07011 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TNFRSF9Q07011 snoU2_19.1-201ENST00000362361 80 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNU6-655P-201ENST00000362858 107 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNY1P10-201ENST00000363268 113 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.194-201ENST00000363985 102 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNU6-266P-201ENST00000364225 107 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.238-201ENST00000364441 102 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.255-201ENST00000364581 97 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.399-201ENST00000383955 105 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNU6-1042P-201ENST00000384204 107 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 Y_RNA.480-201ENST00000384364 102 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNU1-78P-201ENST00000391248 165 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNU6-293P-201ENST00000411259 106 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 DLGAP5P1-201ENST00000430307 464 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC243964.1-201ENST00000441814 261 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNU7-167P-201ENST00000459160 62 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 snoU13.14-201ENST00000459372 104 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.16□□□□□ -2.22
TNFRSF9Q07011 MTND3P5-201ENST00000512798 333 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNA5SP61-201ENST00000516453 100 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNU6-1038P-201ENST00000516516 104 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 RNU6-586P-201ENST00000517265 104 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC104383.1-201ENST00000530297 370 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC024909.2-201ENST00000553035 286 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 MIR4424-201ENST00000585257 86 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC004223.2-201ENST00000590309 544 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AL359821.1-201ENST00000605519 182 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC080013.6-201ENST00000606185 215 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 AC104073.3-201ENST00000610942 955 ntBASIC1.16□□□□□ -2.22
TNFRSF9Q07011 uc_338.34-201ENST00000617467 174 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms