Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMGCS1Q01581 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HMGCS1Q01581 Y_RNA.194-201ENST00000363985 102 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 RNU6-1141P-201ENST00000364520 107 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 RNU4-42P-201ENST00000364738 142 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 RNU4-66P-201ENST00000365199 138 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 Y_RNA.559-201ENST00000384686 107 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 RNU2-16P-201ENST00000410712 136 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC016907.1-201ENST00000419483 435 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AL590135.1-201ENST00000422215 156 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC019205.3-201ENST00000424573 156 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.51□□□□□ -2.17
HMGCS1Q01581 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGCS1Q01581 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC016700.2-201ENST00000446011 156 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC015911.1-201ENST00000495111 156 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC145146.1-201ENST00000496370 254 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC107401.1-201ENST00000503426 685 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC079140.5-201ENST00000507882 310 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 RNU6-835P-201ENST00000516974 104 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGCS1Q01581 CENPUP1-201ENST00000526649 1202 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 MIR4524B-201ENST00000581569 115 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC103987.3-201ENST00000582071 292 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 MIR3941-201ENST00000582572 103 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC010928.2-201ENST00000588017 287 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGCS1Q01581 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.51□□□□□ -2.17
HMGCS1Q01581 VN1R107P-201ENST00000601784 209 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 AC025754.2-201ENST00000606491 432 ntBASIC1.51□□□□□ -2.17
HMGCS1Q01581 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
HMGCS1Q01581 Y_RNA.41-201ENST00000362646 102 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 RNU6-1085P-201ENST00000363576 107 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 RNU6-1322P-201ENST00000364309 107 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMGCS1Q01581 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.5□□□□□ -2.17
HMGCS1Q01581 BX510359.4-201ENST00000423750 193 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.5□□□□□ -2.17
HMGCS1Q01581 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGCS1Q01581 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.5□□□□□ -2.17
HMGCS1Q01581 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGCS1Q01581 RNU6-189P-201ENST00000516120 101 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 GNAI2P1-201ENST00000541815 315 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 AC024909.2-201ENST00000553035 286 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 TRAV32-201ENST00000553993 340 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.5□□□□□ -2.17
HMGCS1Q01581 MIR4713-201ENST00000582691 75 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 AC078795.3-201ENST00000602913 472 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.5□□□□□ -2.17
HMGCS1Q01581 AC092747.3-201ENST00000603769 301 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 AP001836.1-201ENST00000604675 523 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 AL121757.2-201ENST00000611223 313 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 AC103705.1-201ENST00000619013 241 ntBASIC1.5□□□□□ -2.17
HMGCS1Q01581 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMGCS1Q01581 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HMGCS1Q01581 RNU1-17P-201ENST00000363022 152 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 SNORD32B-201ENST00000364460 84 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 SNORA36A-201ENST00000384221 132 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 BTF3L4P2-201ENST00000392798 346 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 MIR1283-2-201ENST00000408621 87 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 RNU6-648P-201ENST00000410190 107 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 RPS20P15-201ENST00000412792 311 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 MTND3P16-201ENST00000452205 344 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 SNORD13-201ENST00000459299 104 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 RNU7-138P-201ENST00000459479 64 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC027575.1-201ENST00000481064 460 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC022447.4-201ENST00000504053 364 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC093259.1-201ENST00000509755 300 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 PTP4A1P4-201ENST00000512479 322 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 RNU6-1069P-201ENST00000516612 133 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 Y_RNA.704-201ENST00000516851 102 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 AP005597.4-201ENST00000526762 229 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC022254.1-201ENST00000567857 235 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC080013.6-201ENST00000606185 215 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC092954.2-201ENST00000609103 430 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AC064836.2-201ENST00000609491 462 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 uc_338.5-201ENST00000611839 155 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AL359880.1-201ENST00000621879 266 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 AL450472.1-202ENST00000637286 180 ntBASIC1.49□□□□□ -2.17
HMGCS1Q01581 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
HMGCS1Q01581 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HMGCS1Q01581 RNU6-1164P-201ENST00000364428 107 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 Y_RNA.372-201ENST00000365599 102 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 RNU6-142P-201ENST00000384019 107 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 Y_RNA.481-201ENST00000384373 102 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 Y_RNA.504-201ENST00000384481 104 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms