Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.56□□□□□ -2.16
IRX3P78415 MTATP6P18-201ENST00000417994 673 ntBASIC1.56□□□□□ -2.16
IRX3P78415 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.56□□□□□ -2.16
IRX3P78415 UBE2V1P4-201ENST00000425374 344 ntBASIC1.56□□□□□ -2.16
IRX3P78415 VN1R108P-201ENST00000431580 830 ntBASIC1.56□□□□□ -2.16
IRX3P78415 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.56□□□□□ -2.16
IRX3P78415 AL162395.1-201ENST00000457882 422 ntBASIC1.56□□□□□ -2.16
IRX3P78415 RNA5SP57-201ENST00000459463 123 ntBASIC1.56□□□□□ -2.16
IRX3P78415 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.56□□□□□ -2.16
IRX3P78415 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.56□□□□□ -2.16
IRX3P78415 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.56□□□□□ -2.16
IRX3P78415 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.56□□□□□ -2.16
IRX3P78415 RNU2-69P-201ENST00000516061 100 ntBASIC1.56□□□□□ -2.16
IRX3P78415 RNU5F-2P-201ENST00000516066 82 ntBASIC1.56□□□□□ -2.16
IRX3P78415 AL137161.1-201ENST00000532231 390 ntBASIC1.56□□□□□ -2.16
IRX3P78415 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.56□□□□□ -2.16
IRX3P78415 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.56□□□□□ -2.16
IRX3P78415 AGGF1P4-201ENST00000568249 801 ntBASIC1.56□□□□□ -2.16
IRX3P78415 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
IRX3P78415 AL022345.1-201ENST00000607292 135 ntBASIC1.56□□□□□ -2.16
IRX3P78415 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.56□□□□□ -2.16
IRX3P78415 AC078883.4-201ENST00000623218 367 ntBASIC1.56□□□□□ -2.16
IRX3P78415 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
IRX3P78415 RNU1-58P-201ENST00000362413 163 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-37P-201ENST00000362692 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 Y_RNA.67-201ENST00000362870 100 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-11P-201ENST00000364234 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-25P-201ENST00000383873 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-1-201ENST00000383898 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-1103P-201ENST00000384150 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-48P-201ENST00000384161 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-36P-201ENST00000384172 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-4P-201ENST00000384205 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-5P-201ENST00000384238 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-3P-201ENST00000384314 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 SNORD116-8-201ENST00000384365 95 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-16P-201ENST00000384385 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-15P-201ENST00000384534 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-1127P-201ENST00000384580 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-2-201ENST00000384627 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-29P-201ENST00000384637 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-9-201ENST00000384776 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-33P-201ENST00000384793 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
IRX3P78415 SNORD70.1-201ENST00000391007 85 ntBASIC1.55□□□□□ -2.16
IRX3P78415 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.55□□□□□ -2.16
IRX3P78415 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.55□□□□□ -2.16
IRX3P78415 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.55□□□□□ -2.16
IRX3P78415 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.55□□□□□ -2.16
IRX3P78415 AC243964.1-201ENST00000441814 261 ntBASIC1.55□□□□□ -2.16
IRX3P78415 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.55□□□□□ -2.16
IRX3P78415 AL122001.1-201ENST00000457027 370 ntBASIC1.55□□□□□ -2.16
IRX3P78415 SCARNA18-201ENST00000459004 134 ntBASIC1.55□□□□□ -2.16
IRX3P78415 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.55□□□□□ -2.16
IRX3P78415 MTCYBP18-201ENST00000501056 747 ntBASIC1.55□□□□□ -2.16
IRX3P78415 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.55□□□□□ -2.16
IRX3P78415 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-567P-201ENST00000516746 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.55□□□□□ -2.16
IRX3P78415 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.55□□□□□ -2.16
IRX3P78415 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.55□□□□□ -2.16
IRX3P78415 RNU6-6P-201ENST00000606623 107 ntBASIC1.55□□□□□ -2.16
IRX3P78415 Z69908.1-201ENST00000622603 247 ntBASIC1.55□□□□□ -2.16
IRX3P78415 snoU2_19.1-201ENST00000362361 80 ntBASIC1.54□□□□□ -2.16
IRX3P78415 RNU6-944P-201ENST00000364023 107 ntBASIC1.54□□□□□ -2.16
IRX3P78415 RNU6-282P-201ENST00000365357 103 ntBASIC1.54□□□□□ -2.16
IRX3P78415 RNY1P14-201ENST00000384426 108 ntBASIC1.54□□□□□ -2.16
IRX3P78415 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.54□□□□□ -2.16
IRX3P78415 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.54□□□□□ -2.16
IRX3P78415 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.54□□□□□ -2.16
IRX3P78415 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
IRX3P78415 MTCO2P11-201ENST00000431069 680 ntBASIC1.54□□□□□ -2.16
IRX3P78415 RPS29P15-201ENST00000458329 171 ntBASIC1.54□□□□□ -2.16
IRX3P78415 RNU7-167P-201ENST00000459160 62 ntBASIC1.54□□□□□ -2.16
IRX3P78415 AC004223.1-201ENST00000479840 271 ntBASIC1.54□□□□□ -2.16
IRX3P78415 BET1P1-201ENST00000482276 359 ntBASIC1.54□□□□□ -2.16
IRX3P78415 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.54□□□□□ -2.16
IRX3P78415 RNU6-430P-201ENST00000517078 107 ntBASIC1.54□□□□□ -2.16
IRX3P78415 AC084364.2-201ENST00000546924 395 ntBASIC1.54□□□□□ -2.16
IRX3P78415 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.54□□□□□ -2.16
IRX3P78415 SUB1P2-201ENST00000556401 297 ntBASIC1.54□□□□□ -2.16
IRX3P78415 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.54□□□□□ -2.16
IRX3P78415 AC040904.1-201ENST00000590850 223 ntBASIC1.54□□□□□ -2.16
IRX3P78415 AL078603.1-201ENST00000603824 313 ntBASIC1.54□□□□□ -2.16
IRX3P78415 AL034555.1-201ENST00000604816 211 ntBASIC1.54□□□□□ -2.16
IRX3P78415 U2.17-201ENST00000611454 95 ntBASIC1.54□□□□□ -2.16
IRX3P78415 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
IRX3P78415 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.54□□□□□ -2.16
IRX3P78415 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.54□□□□□ -2.16
IRX3P78415 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
IRX3P78415 RNU11-3P-201ENST00000391111 133 ntBASIC1.53□□□□□ -2.16
IRX3P78415 RPL21P1-201ENST00000399532 476 ntBASIC1.53□□□□□ -2.16
IRX3P78415 MTCYBP2-201ENST00000407745 171 ntBASIC1.53□□□□□ -2.16
IRX3P78415 RN7SKP142-201ENST00000411236 328 ntBASIC1.53□□□□□ -2.16
IRX3P78415 RNU6-293P-201ENST00000411259 106 ntBASIC1.53□□□□□ -2.16
IRX3P78415 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.53□□□□□ -2.16
IRX3P78415 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.53□□□□□ -2.16
IRX3P78415 AL133396.1-201ENST00000432048 687 ntBASIC1.53□□□□□ -2.16
IRX3P78415 AC244670.1-201ENST00000436879 112 ntBASIC1.53□□□□□ -2.16
IRX3P78415 AC099513.1-201ENST00000490423 301 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms