Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.62□□□□□ -2.31
TPM4P67936 RPS23P5-201ENST00000495419 428 ntBASIC0.62□□□□□ -2.31
TPM4P67936 RBBP4P6-201ENST00000508098 202 ntBASIC0.62□□□□□ -2.31
TPM4P67936 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.62□□□□□ -2.31
TPM4P67936 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.62□□□□□ -2.31
TPM4P67936 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
TPM4P67936 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
TPM4P67936 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TPM4P67936 RNU6-378P-201ENST00000384324 107 ntBASIC0.61□□□□□ -2.31
TPM4P67936 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.61□□□□□ -2.31
TPM4P67936 AC245047.7-201ENST00000440265 293 ntBASIC0.61□□□□□ -2.31
TPM4P67936 COX6CP6-201ENST00000490840 228 ntBASIC0.61□□□□□ -2.31
TPM4P67936 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.61□□□□□ -2.31
TPM4P67936 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.61□□□□□ -2.31
TPM4P67936 RNU6-377P-201ENST00000515965 102 ntBASIC0.61□□□□□ -2.31
TPM4P67936 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
TPM4P67936 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.61□□□□□ -2.31
TPM4P67936 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
TPM4P67936 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.61□□□□□ -2.31
TPM4P67936 AC064872.1-201ENST00000604823 1072 ntBASIC0.61□□□□□ -2.31
TPM4P67936 AL359821.1-201ENST00000605519 182 ntBASIC0.61□□□□□ -2.31
TPM4P67936 AC013244.3-201ENST00000605614 388 ntBASIC0.61□□□□□ -2.31
TPM4P67936 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.61□□□□□ -2.31
TPM4P67936 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.61□□□□□ -2.31
TPM4P67936 BX322639.1-202ENST00000423987 2213 ntBASIC0.6□□□□□ -2.31
TPM4P67936 AL391994.1-201ENST00000254724 282 ntBASIC0.6□□□□□ -2.31
TPM4P67936 AC092268.1-201ENST00000342691 405 ntBASIC0.6□□□□□ -2.31
TPM4P67936 U3.4-201ENST00000363352 213 ntBASIC0.6□□□□□ -2.31
TPM4P67936 SNORD32A-201ENST00000364805 84 ntBASIC0.6□□□□□ -2.31
TPM4P67936 AC000111.3-201ENST00000433478 193 ntBASIC0.6□□□□□ -2.31
TPM4P67936 C1DP4-201ENST00000455429 424 ntBASIC0.6□□□□□ -2.31
TPM4P67936 RNU2-34P-201ENST00000516534 121 ntBASIC0.6□□□□□ -2.31
TPM4P67936 AC092451.2-201ENST00000538746 658 ntBASIC0.6□□□□□ -2.31
TPM4P67936 HSPE1P4-201ENST00000550617 308 ntBASIC0.6□□□□□ -2.31
TPM4P67936 TPRKBP2-201ENST00000565969 475 ntBASIC0.6□□□□□ -2.31
TPM4P67936 MIR4524B-201ENST00000581569 115 ntBASIC0.6□□□□□ -2.31
TPM4P67936 AC068790.6-201ENST00000602558 258 ntBASIC0.6□□□□□ -2.31
TPM4P67936 AC078795.3-201ENST00000602913 472 ntBASIC0.6□□□□□ -2.31
TPM4P67936 AC104465.1-201ENST00000611365 139 ntBASIC0.6□□□□□ -2.31
TPM4P67936 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
TPM4P67936 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.6□□□□□ -2.31
TPM4P67936 AC009509.4-201ENST00000619202 509 ntBASIC0.6□□□□□ -2.31
TPM4P67936 SNORA33-201ENST00000363664 130 ntBASIC0.59□□□□□ -2.31
TPM4P67936 RNU6-418P-201ENST00000384035 107 ntBASIC0.59□□□□□ -2.31
TPM4P67936 RNU6-39P-201ENST00000384344 107 ntBASIC0.59□□□□□ -2.31
TPM4P67936 AC073614.1-201ENST00000438690 650 ntBASIC0.59□□□□□ -2.31
TPM4P67936 RPL22P17-201ENST00000438729 315 ntBASIC0.59□□□□□ -2.31
TPM4P67936 AC092991.1-201ENST00000477176 376 ntBASIC0.59□□□□□ -2.31
TPM4P67936 RNA5SP458-201ENST00000516188 119 ntBASIC0.59□□□□□ -2.31
TPM4P67936 RNA5SP255-201ENST00000516370 107 ntBASIC0.59□□□□□ -2.31
TPM4P67936 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.59□□□□□ -2.31
TPM4P67936 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.59□□□□□ -2.31
TPM4P67936 TMF1P1-201ENST00000576058 373 ntBASIC0.59□□□□□ -2.31
TPM4P67936 MIR5695-201ENST00000579717 85 ntBASIC0.59□□□□□ -2.31
TPM4P67936 AP001004.1-201ENST00000582468 324 ntBASIC0.59□□□□□ -2.31
TPM4P67936 AL929325.1-201ENST00000603096 117 ntBASIC0.59□□□□□ -2.31
TPM4P67936 AL513534.2-201ENST00000603836 250 ntBASIC0.59□□□□□ -2.31
TPM4P67936 AL356157.2-201ENST00000605122 111 ntBASIC0.59□□□□□ -2.31
TPM4P67936 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.59□□□□□ -2.31
TPM4P67936 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.58□□□□□ -2.32
TPM4P67936 Y_RNA.363-201ENST00000365529 113 ntBASIC0.58□□□□□ -2.32
TPM4P67936 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
TPM4P67936 RNU6-950P-201ENST00000384651 107 ntBASIC0.58□□□□□ -2.32
TPM4P67936 RPL21P1-201ENST00000399532 476 ntBASIC0.58□□□□□ -2.32
TPM4P67936 MIR942-201ENST00000401111 86 ntBASIC0.58□□□□□ -2.32
TPM4P67936 AC137499.1-201ENST00000427602 88 ntBASIC0.58□□□□□ -2.32
TPM4P67936 USP9YP28-201ENST00000435142 589 ntBASIC0.58□□□□□ -2.32
TPM4P67936 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.58□□□□□ -2.32
TPM4P67936 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
TPM4P67936 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.58□□□□□ -2.32
TPM4P67936 MTCYBP1-201ENST00000454315 1119 ntBASIC0.58□□□□□ -2.32
TPM4P67936 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.58□□□□□ -2.32
TPM4P67936 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.58□□□□□ -2.32
TPM4P67936 AC117522.1-201ENST00000509821 380 ntBASIC0.58□□□□□ -2.32
TPM4P67936 AC112206.4-201ENST00000515142 405 ntBASIC0.58□□□□□ -2.32
TPM4P67936 AC090517.1-201ENST00000569307 266 ntBASIC0.58□□□□□ -2.32
TPM4P67936 AL158042.1-201ENST00000605338 460 ntBASIC0.58□□□□□ -2.32
TPM4P67936 AC009994.1-201ENST00000606889 253 ntBASIC0.58□□□□□ -2.32
TPM4P67936 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.58□□□□□ -2.32
TPM4P67936 AL359740.1-201ENST00000624340 592 ntBASIC0.58□□□□□ -2.32
TPM4P67936 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
TPM4P67936 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TPM4P67936 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
TPM4P67936 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
TPM4P67936 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
TPM4P67936 RNU6-336P-201ENST00000364891 107 ntBASIC0.57□□□□□ -2.32
TPM4P67936 RNU6-61P-201ENST00000365528 109 ntBASIC0.57□□□□□ -2.32
TPM4P67936 RNU6-969P-201ENST00000383900 105 ntBASIC0.57□□□□□ -2.32
TPM4P67936 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.57□□□□□ -2.32
TPM4P67936 AF228730.1-201ENST00000397972 663 ntBASIC0.57□□□□□ -2.32
TPM4P67936 RNU2-39P-201ENST00000410604 198 ntBASIC0.57□□□□□ -2.32
TPM4P67936 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.57□□□□□ -2.32
TPM4P67936 AL133396.1-201ENST00000432048 687 ntBASIC0.57□□□□□ -2.32
TPM4P67936 MTCO3P18-201ENST00000440206 761 ntBASIC0.57□□□□□ -2.32
TPM4P67936 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.57□□□□□ -2.32
TPM4P67936 RPS27P22-201ENST00000478056 241 ntBASIC0.57□□□□□ -2.32
TPM4P67936 BET1P1-201ENST00000482276 359 ntBASIC0.57□□□□□ -2.32
TPM4P67936 AC016550.1-201ENST00000505348 785 ntBASIC0.57□□□□□ -2.32
TPM4P67936 AC091435.1-201ENST00000505442 584 ntBASIC0.57□□□□□ -2.32
TPM4P67936 MTCO3P7-201ENST00000510008 774 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms