Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP46P62068 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.57□□□□□ -1.68
USP46P62068 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP46P62068 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.56□□□□□ -1.68
USP46P62068 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.56□□□□□ -1.68
USP46P62068 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
USP46P62068 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.56□□□□□ -1.68
USP46P62068 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
USP46P62068 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP46P62068 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP46P62068 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.56□□□□□ -1.68
USP46P62068 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.56□□□□□ -1.68
USP46P62068 SNORD114-7-201ENST00000362520 77 ntBASIC4.56□□□□□ -1.68
USP46P62068 Y_RNA.114-201ENST00000363265 113 ntBASIC4.56□□□□□ -1.68
USP46P62068 RNU6-1323P-201ENST00000384025 107 ntBASIC4.56□□□□□ -1.68
USP46P62068 RPL23AP48-201ENST00000406913 488 ntBASIC4.56□□□□□ -1.68
USP46P62068 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.56□□□□□ -1.68
USP46P62068 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.56□□□□□ -1.68
USP46P62068 HMGN2P9-201ENST00000476875 229 ntBASIC4.56□□□□□ -1.68
USP46P62068 RNA5SP49-201ENST00000516450 115 ntBASIC4.56□□□□□ -1.68
USP46P62068 RN7SKP21-201ENST00000516503 220 ntBASIC4.56□□□□□ -1.68
USP46P62068 RNU7-116P-201ENST00000516940 62 ntBASIC4.56□□□□□ -1.68
USP46P62068 MRPL49P2-201ENST00000521066 465 ntBASIC4.56□□□□□ -1.68
USP46P62068 AP003730.1-201ENST00000524605 285 ntBASIC4.56□□□□□ -1.68
USP46P62068 AC069240.1-201ENST00000548774 375 ntBASIC4.56□□□□□ -1.68
USP46P62068 AL049861.1-201ENST00000603130 150 ntBASIC4.56□□□□□ -1.68
USP46P62068 AC005972.2-201ENST00000604690 348 ntBASIC4.56□□□□□ -1.68
USP46P62068 AC007546.2-201ENST00000623996 360 ntBASIC4.56□□□□□ -1.68
USP46P62068 AC068724.3-201ENST00000625906 87 ntBASIC4.56□□□□□ -1.68
USP46P62068 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
USP46P62068 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP46P62068 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP46P62068 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP46P62068 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP46P62068 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
USP46P62068 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP46P62068 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP46P62068 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
USP46P62068 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP46P62068 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
USP46P62068 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP46P62068 AL356292.1-201ENST00000283110 373 ntBASIC4.55□□□□□ -1.68
USP46P62068 RNA5SP307-201ENST00000362863 116 ntBASIC4.55□□□□□ -1.68
USP46P62068 Y_RNA.120-201ENST00000363304 110 ntBASIC4.55□□□□□ -1.68
USP46P62068 RNA5SP496-201ENST00000391240 109 ntBASIC4.55□□□□□ -1.68
USP46P62068 AL139095.1-201ENST00000404326 391 ntBASIC4.55□□□□□ -1.68
USP46P62068 YME1L1P1-201ENST00000429435 297 ntBASIC4.55□□□□□ -1.68
USP46P62068 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.55□□□□□ -1.68
USP46P62068 AC090515.1-201ENST00000465295 476 ntBASIC4.55□□□□□ -1.68
USP46P62068 PARP4P3-201ENST00000510265 317 ntBASIC4.55□□□□□ -1.68
USP46P62068 AP000867.2-201ENST00000532468 320 ntBASIC4.55□□□□□ -1.68
USP46P62068 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.55□□□□□ -1.68
USP46P62068 AC022655.2-201ENST00000577280 318 ntBASIC4.55□□□□□ -1.68
USP46P62068 MIR6076-201ENST00000617521 113 ntBASIC4.55□□□□□ -1.68
USP46P62068 AL121890.5-201ENST00000620848 304 ntBASIC4.55□□□□□ -1.68
USP46P62068 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.55□□□□□ -1.68
USP46P62068 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP46P62068 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP46P62068 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP46P62068 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.54□□□□□ -1.68
USP46P62068 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP46P62068 AC008555.8-201ENST00000623602 2168 ntBASIC4.54□□□□□ -1.68
USP46P62068 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.54□□□□□ -1.68
USP46P62068 MFSD8-242ENST00000641690 4199 ntBASIC4.54□□□□□ -1.68
USP46P62068 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
USP46P62068 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP46P62068 MIR383-201ENST00000362257 73 ntBASIC4.54□□□□□ -1.68
USP46P62068 Y_RNA.35-201ENST00000362601 101 ntBASIC4.54□□□□□ -1.68
USP46P62068 SNORD18B-201ENST00000365659 72 ntBASIC4.54□□□□□ -1.68
USP46P62068 RNU6-198P-201ENST00000384258 104 ntBASIC4.54□□□□□ -1.68
USP46P62068 SNORD14D-201ENST00000384390 87 ntBASIC4.54□□□□□ -1.68
USP46P62068 SNORA74C-2-201ENST00000411179 201 ntBASIC4.54□□□□□ -1.68
USP46P62068 AL157831.1-201ENST00000426134 473 ntBASIC4.54□□□□□ -1.68
USP46P62068 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.54□□□□□ -1.68
USP46P62068 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.54□□□□□ -1.68
USP46P62068 AC080013.2-201ENST00000460866 323 ntBASIC4.54□□□□□ -1.68
USP46P62068 RN7SL812P-201ENST00000493791 279 ntBASIC4.54□□□□□ -1.68
USP46P62068 RNA5SP519-201ENST00000516480 119 ntBASIC4.54□□□□□ -1.68
USP46P62068 RNU6-1098P-201ENST00000516772 96 ntBASIC4.54□□□□□ -1.68
USP46P62068 RPL30P11-203ENST00000598995 310 ntBASIC4.54□□□□□ -1.68
USP46P62068 RPL17P51-201ENST00000605218 238 ntBASIC4.54□□□□□ -1.68
USP46P62068 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USP46P62068 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP46P62068 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP46P62068 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USP46P62068 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP46P62068 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
USP46P62068 AC006504.1-201ENST00000562493 3666 ntBASIC4.53□□□□□ -1.68
USP46P62068 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
USP46P62068 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.53□□□□□ -1.68
USP46P62068 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.53□□□□□ -1.68
USP46P62068 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.53□□□□□ -1.68
USP46P62068 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP46P62068 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP46P62068 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
USP46P62068 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP46P62068 SNORA27.1-201ENST00000362604 124 ntBASIC4.53□□□□□ -1.68
USP46P62068 RNU6-271P-201ENST00000363858 105 ntBASIC4.53□□□□□ -1.68
USP46P62068 RNU6-978P-201ENST00000364371 103 ntBASIC4.53□□□□□ -1.68
USP46P62068 SNORA70C-201ENST00000384538 135 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms