Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SNORD114-30-201ENST00000364448 72 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 RNU4-9P-201ENST00000364951 139 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 SNORA29-201ENST00000384183 140 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 Y_RNA.533-201ENST00000384596 114 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 MIR518C-201ENST00000384822 101 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 MIR29B2-201ENST00000385055 81 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 RNU6-220P-201ENST00000390919 107 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 MIR887-201ENST00000401258 79 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 SNORD88.1-201ENST00000408684 91 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN2P57739 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN2P57739 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN2P57739 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN2P57739 AL445687.1-201ENST00000439946 251 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 AL353705.4-201ENST00000449661 238 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 RPL30P15-201ENST00000457129 321 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 AC140059.1-201ENST00000489238 361 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN2P57739 RNA5SP384-201ENST00000516615 116 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 SNORA31.16-201ENST00000516773 139 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 RNU6-56P-201ENST00000516986 93 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.51□□□□□ -2.01
CLDN2P57739 MRPS36P4-201ENST00000534436 298 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 AC093249.1-201ENST00000567049 203 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 CYP4A27P-201ENST00000567218 190 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 MIR3923-201ENST00000579521 83 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN2P57739 Z98751.3-201ENST00000604447 521 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 AC084781.2-201ENST00000615568 161 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 MIR5739-201ENST00000619803 80 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 U4.3-201ENST00000621047 82 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 SCARNA4-201ENST00000629045 128 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN2P57739 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.51□□□□□ -2.01
CLDN2P57739 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CLDN2P57739 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CLDN2P57739 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN2P57739 MTND5P10-201ENST00000603719 1809 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 Y_RNA.187-201ENST00000363918 113 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 Y_RNA.460-201ENST00000384255 102 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 FO393413.1-201ENST00000402892 195 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 RPS20P15-201ENST00000412792 311 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 AF228730.4-201ENST00000421457 183 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 AL358453.1-201ENST00000422522 250 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 AL590556.1-201ENST00000423231 483 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 AC012306.1-201ENST00000423267 114 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 UBBP3-201ENST00000445497 241 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 RN7SKP210-201ENST00000459176 261 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 RN7SL297P-201ENST00000483161 293 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 RNA5SP385-201ENST00000515947 110 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 SCARNA16.2-201ENST00000516520 172 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.5□□□□□ -2.01
CLDN2P57739 CBX3P8-201ENST00000532412 525 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 SNORD53-201ENST00000579969 78 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN2P57739 AL158827.2-201ENST00000602494 330 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 AL078605.1-201ENST00000603529 500 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 CYP2C61P-201ENST00000604072 290 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 RPL23AP88-201ENST00000605759 454 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 AL133255.1-201ENST00000606374 441 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDN2P57739 AL590808.1-201ENST00000618696 141 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN2P57739 AL691447.3-201ENST00000635020 330 ntBASIC2.5□□□□□ -2.01
CLDN2P57739 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN2P57739 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN2P57739 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN2P57739 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CLDN2P57739 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN2P57739 RNA5SP240-201ENST00000365355 128 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 SNORA36A-201ENST00000384221 132 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 RNU6-331P-201ENST00000384724 107 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 MTCYBP2-201ENST00000407745 171 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 RNA5SP494-201ENST00000410653 129 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 RN7SKP284-201ENST00000411002 343 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 RNU2-25P-201ENST00000411041 191 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 RNU6-1304P-201ENST00000411374 106 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN2P57739 RPS26P42-201ENST00000413485 326 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 RPL23AP50-201ENST00000434149 455 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AL353752.1-201ENST00000454946 260 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 MTCO3P10-201ENST00000455912 772 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 CYP2C59P-201ENST00000457790 269 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 RPL30P10-201ENST00000488148 337 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 RPL23AP75-201ENST00000491601 451 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AC021146.2-201ENST00000504736 556 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 RN7SKP40-201ENST00000517211 242 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN2P57739 AC090616.3-201ENST00000582184 217 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 MIR4506-201ENST00000584693 77 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AL713866.2-201ENST00000603579 219 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AL627309.6-201ENST00000606857 840 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AL050343.2-201ENST00000607338 280 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AC069234.5-201ENST00000611056 416 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AC005520.5-201ENST00000613926 164 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AC008121.3-201ENST00000618726 433 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AC090574.1-201ENST00000623186 233 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 CTSLP2-204ENST00000629029 392 ntBASIC2.49□□□□□ -2.01
CLDN2P57739 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms