Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MTND5P25-201ENST00000430499 799 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 GTF2IP13-201ENST00000438487 386 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 AC079781.2-201ENST00000446424 169 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 MTCYBP1-201ENST00000454315 1119 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 RNA5SP269-201ENST00000459032 137 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 RPS26P55-201ENST00000471178 356 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 RPL26P26-201ENST00000480251 434 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 MTCYBP35-201ENST00000503630 1137 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 ARL2BPP4-201ENST00000506854 471 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 SNORA3.4-201ENST00000515969 96 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 RNU6-902P-201ENST00000517212 91 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 MTND2P32-201ENST00000521584 1038 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.2□□□□□ -2.22
CLDN6P56747 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.2□□□□□ -2.22
CLDN6P56747 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.2□□□□□ -2.22
CLDN6P56747 HSPE1P4-201ENST00000550617 308 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 AL160236.1-201ENST00000556317 195 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.2□□□□□ -2.22
CLDN6P56747 Z99289.3-201ENST00000605586 594 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLDN6P56747 AC022960.3-201ENST00000619794 441 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 ICE2P2-201ENST00000483823 2787 ntBASIC1.2□□□□□ -2.22
CLDN6P56747 U3.4-201ENST00000363352 213 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 SNORD114-26-201ENST00000363543 72 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 MIR520A-201ENST00000384862 85 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 EBAG9P1-201ENST00000418955 543 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.19□□□□□ -2.22
CLDN6P56747 GPR143P-201ENST00000434155 205 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.19□□□□□ -2.22
CLDN6P56747 HSPE1P9-201ENST00000440046 311 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 MTND1P30-201ENST00000441241 901 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 JTBP1-201ENST00000441314 247 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 AL022238.1-201ENST00000442557 355 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 RPL31P3-201ENST00000458430 332 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 AC099513.1-201ENST00000490423 301 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.19□□□□□ -2.22
CLDN6P56747 MTCO3P28-201ENST00000513351 515 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 AC100821.1-201ENST00000523153 2479 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 ZNF321P-202ENST00000550843 495 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.19□□□□□ -2.22
CLDN6P56747 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.19□□□□□ -2.22
CLDN6P56747 MIR3923-201ENST00000579521 83 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.19□□□□□ -2.22
CLDN6P56747 MIR151B-201ENST00000584249 96 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 AC245884.10-201ENST00000597355 337 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 AC069114.2-201ENST00000604699 304 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 MIR6788-201ENST00000618842 66 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.19□□□□□ -2.22
CLDN6P56747 MTND4P14-201ENST00000435799 1354 ntBASIC1.19□□□□□ -2.22
CLDN6P56747 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CLDN6P56747 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CLDN6P56747 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CLDN6P56747 RNA5SP201-201ENST00000410316 124 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 RNU2-7P-201ENST00000410794 178 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 RNU2-41P-201ENST00000410991 178 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 RPS3AP3-201ENST00000411933 242 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 AC078809.1-201ENST00000427601 140 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 AL135790.2-201ENST00000437701 267 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 RPL9P9-202ENST00000466501 579 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.18□□□□□ -2.22
CLDN6P56747 MTCO3P7-201ENST00000510008 774 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 SNORD60.2-201ENST00000516883 86 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 MIR3682-201ENST00000581338 84 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.18□□□□□ -2.22
CLDN6P56747 AC073413.2-201ENST00000604332 360 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 AL121890.5-201ENST00000620848 304 ntBASIC1.18□□□□□ -2.22
CLDN6P56747 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.18□□□□□ -2.22
CLDN6P56747 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CLDN6P56747 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CLDN6P56747 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
CLDN6P56747 U3.9-201ENST00000363823 204 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 RNU6-1080P-201ENST00000383982 107 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 SNORA12.2-201ENST00000391040 156 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 RN7SKP61-201ENST00000410642 295 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 RNU6-195P-201ENST00000411352 109 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 FTH1P12-201ENST00000432137 551 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 AL031274.1-201ENST00000450334 232 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.17□□□□□ -2.22
CLDN6P56747 RNU7-182P-201ENST00000459009 62 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 RNU7-14P-201ENST00000459331 62 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 AC092991.1-201ENST00000477176 376 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 AC005178.1-201ENST00000508392 440 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 RNU5F-4P-201ENST00000516581 114 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 RNA5SP503-201ENST00000517047 117 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 RNU6-1223P-201ENST00000517124 104 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 RNA5SP437-201ENST00000517249 129 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 AC078795.3-201ENST00000602913 472 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 AC091805.2-201ENST00000603848 235 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 AC008250.2-201ENST00000615261 205 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 AC091304.6-201ENST00000619761 202 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 SEPT14P19-203ENST00000633205 211 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 MTND4P4-201ENST00000439033 1366 ntBASIC1.17□□□□□ -2.22
CLDN6P56747 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CLDN6P56747 AL159152.1-201ENST00000635019 2587 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 AC092268.1-201ENST00000342691 405 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms