Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC096638.1-201ENST00000444678 216 ntBASIC3.13□□□□□ -1.91
PER3P56645 AL441985.1-201ENST00000457727 251 ntBASIC3.13□□□□□ -1.91
PER3P56645 AC112771.1-201ENST00000463581 102 ntBASIC3.13□□□□□ -1.91
PER3P56645 HMGB1P35-201ENST00000503360 598 ntBASIC3.13□□□□□ -1.91
PER3P56645 RNU6-1114P-201ENST00000516022 107 ntBASIC3.13□□□□□ -1.91
PER3P56645 RNU6-1012P-201ENST00000516606 109 ntBASIC3.13□□□□□ -1.91
PER3P56645 AC091144.1-201ENST00000519573 138 ntBASIC3.13□□□□□ -1.91
PER3P56645 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.13□□□□□ -1.91
PER3P56645 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.13□□□□□ -1.91
PER3P56645 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.13□□□□□ -1.91
PER3P56645 AC006006.1-201ENST00000603082 144 ntBASIC3.13□□□□□ -1.91
PER3P56645 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.13□□□□□ -1.91
PER3P56645 AC096772.1-201ENST00000609146 564 ntBASIC3.13□□□□□ -1.91
PER3P56645 AC137590.2-201ENST00000619709 240 ntBASIC3.13□□□□□ -1.91
PER3P56645 MIR8062-201ENST00000621515 85 ntBASIC3.13□□□□□ -1.91
PER3P56645 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PER3P56645 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PER3P56645 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.12□□□□□ -1.91
PER3P56645 RNA5SP383-201ENST00000362934 120 ntBASIC3.12□□□□□ -1.91
PER3P56645 RNU6-702P-201ENST00000364982 107 ntBASIC3.12□□□□□ -1.91
PER3P56645 SNORD17-201ENST00000390930 237 ntBASIC3.12□□□□□ -1.91
PER3P56645 RNU6-159P-201ENST00000391080 106 ntBASIC3.12□□□□□ -1.91
PER3P56645 AL356968.1-201ENST00000416622 474 ntBASIC3.12□□□□□ -1.91
PER3P56645 DBIP2-201ENST00000419076 262 ntBASIC3.12□□□□□ -1.91
PER3P56645 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.12□□□□□ -1.91
PER3P56645 TRIAP1P1-201ENST00000427062 225 ntBASIC3.12□□□□□ -1.91
PER3P56645 AL445305.1-201ENST00000432577 575 ntBASIC3.12□□□□□ -1.91
PER3P56645 RPS15AP7-201ENST00000439294 405 ntBASIC3.12□□□□□ -1.91
PER3P56645 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.12□□□□□ -1.91
PER3P56645 AC093663.1-201ENST00000497190 394 ntBASIC3.12□□□□□ -1.91
PER3P56645 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.12□□□□□ -1.91
PER3P56645 Y_RNA.668-201ENST00000516233 93 ntBASIC3.12□□□□□ -1.91
PER3P56645 RNY3P15-201ENST00000516297 97 ntBASIC3.12□□□□□ -1.91
PER3P56645 SNORA64.4-201ENST00000516632 81 ntBASIC3.12□□□□□ -1.91
PER3P56645 RNU6-579P-201ENST00000516879 102 ntBASIC3.12□□□□□ -1.91
PER3P56645 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PER3P56645 HSPE1P20-201ENST00000538133 289 ntBASIC3.12□□□□□ -1.91
PER3P56645 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.12□□□□□ -1.91
PER3P56645 MIR5004-201ENST00000579078 107 ntBASIC3.12□□□□□ -1.91
PER3P56645 uc_338.14-201ENST00000613162 166 ntBASIC3.12□□□□□ -1.91
PER3P56645 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.12□□□□□ -1.91
PER3P56645 AL109809.4-201ENST00000603520 2185 ntBASIC3.12□□□□□ -1.91
PER3P56645 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PER3P56645 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PER3P56645 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PER3P56645 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.11□□□□□ -1.91
PER3P56645 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
PER3P56645 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PER3P56645 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PER3P56645 Y_RNA.19-201ENST00000362462 99 ntBASIC3.11□□□□□ -1.91
PER3P56645 RNA5SP361-201ENST00000362686 118 ntBASIC3.11□□□□□ -1.91
PER3P56645 RNU6-799P-201ENST00000363567 107 ntBASIC3.11□□□□□ -1.91
PER3P56645 RNU6-137P-201ENST00000363680 108 ntBASIC3.11□□□□□ -1.91
PER3P56645 RNU6-281P-201ENST00000384212 103 ntBASIC3.11□□□□□ -1.91
PER3P56645 RNU6-541P-201ENST00000384709 110 ntBASIC3.11□□□□□ -1.91
PER3P56645 MT-TW-201ENST00000387382 68 ntBASIC3.11□□□□□ -1.91
PER3P56645 AL358075.3-201ENST00000426289 226 ntBASIC3.11□□□□□ -1.91
PER3P56645 SDAD1P3-201ENST00000427380 333 ntBASIC3.11□□□□□ -1.91
PER3P56645 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.11□□□□□ -1.91
PER3P56645 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
PER3P56645 AC079598.5-201ENST00000547460 117 ntBASIC3.11□□□□□ -1.91
PER3P56645 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.11□□□□□ -1.91
PER3P56645 MIR3136-201ENST00000583498 78 ntBASIC3.11□□□□□ -1.91
PER3P56645 MIR4276-201ENST00000584832 70 ntBASIC3.11□□□□□ -1.91
PER3P56645 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.11□□□□□ -1.91
PER3P56645 AC240442.1-201ENST00000616055 283 ntBASIC3.11□□□□□ -1.91
PER3P56645 AC006386.2-201ENST00000624491 75 ntBASIC3.11□□□□□ -1.91
PER3P56645 AC012005.1-201ENST00000624575 75 ntBASIC3.11□□□□□ -1.91
PER3P56645 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
PER3P56645 AC091564.4-201ENST00000533934 2194 ntBASIC3.11□□□□□ -1.91
PER3P56645 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PER3P56645 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.1□□□□□ -1.91
PER3P56645 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PER3P56645 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PER3P56645 Y_RNA.183-201ENST00000363882 113 ntBASIC3.1□□□□□ -1.91
PER3P56645 CD24P4-201ENST00000382840 243 ntBASIC3.1□□□□□ -1.91
PER3P56645 Y_RNA.401-201ENST00000383965 117 ntBASIC3.1□□□□□ -1.91
PER3P56645 MIR186-201ENST00000384988 86 ntBASIC3.1□□□□□ -1.91
PER3P56645 MIR549A-201ENST00000385268 96 ntBASIC3.1□□□□□ -1.91
PER3P56645 RNA5SP354-201ENST00000391247 136 ntBASIC3.1□□□□□ -1.91
PER3P56645 U3.39-201ENST00000408569 239 ntBASIC3.1□□□□□ -1.91
PER3P56645 RNU4-47P-201ENST00000410876 114 ntBASIC3.1□□□□□ -1.91
PER3P56645 PCNPP5-201ENST00000452246 481 ntBASIC3.1□□□□□ -1.91
PER3P56645 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.1□□□□□ -1.91
PER3P56645 LINC01399-202ENST00000458450 244 ntBASIC3.1□□□□□ -1.91
PER3P56645 RPL23AP70-201ENST00000483361 460 ntBASIC3.1□□□□□ -1.91
PER3P56645 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
PER3P56645 SCARNA17.1-201ENST00000516211 143 ntBASIC3.1□□□□□ -1.91
PER3P56645 SCARNA17.2-201ENST00000516334 143 ntBASIC3.1□□□□□ -1.91
PER3P56645 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.1□□□□□ -1.91
PER3P56645 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.1□□□□□ -1.91
PER3P56645 CYP4A27P-201ENST00000567218 190 ntBASIC3.1□□□□□ -1.91
PER3P56645 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
PER3P56645 AL034555.1-201ENST00000604816 211 ntBASIC3.1□□□□□ -1.91
PER3P56645 AC005520.5-201ENST00000613926 164 ntBASIC3.1□□□□□ -1.91
PER3P56645 SCARNA17.4-201ENST00000614296 143 ntBASIC3.1□□□□□ -1.91
PER3P56645 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.1□□□□□ -1.91
PER3P56645 MFSD8-233ENST00000641482 4860 ntBASIC3.1□□□□□ -1.91
PER3P56645 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PER3P56645 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms