Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MTCO1P19-201ENST00000443487 500 ntBASIC1.52□□□□□ -2.17
CDH4P55283 AL356010.1-201ENST00000456364 102 ntBASIC1.52□□□□□ -2.17
CDH4P55283 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.52□□□□□ -2.17
CDH4P55283 RNU6-956P-201ENST00000458868 103 ntBASIC1.52□□□□□ -2.17
CDH4P55283 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
CDH4P55283 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.52□□□□□ -2.17
CDH4P55283 AC010486.3-201ENST00000511602 785 ntBASIC1.52□□□□□ -2.17
CDH4P55283 Y_RNA.675-201ENST00000516389 149 ntBASIC1.52□□□□□ -2.17
CDH4P55283 SNORA31.17-201ENST00000516953 127 ntBASIC1.52□□□□□ -2.17
CDH4P55283 SNORA25.17-201ENST00000517184 124 ntBASIC1.52□□□□□ -2.17
CDH4P55283 AC005786.1-201ENST00000588553 154 ntBASIC1.52□□□□□ -2.17
CDH4P55283 AC068790.2-201ENST00000602601 557 ntBASIC1.52□□□□□ -2.17
CDH4P55283 AC009509.4-201ENST00000619202 509 ntBASIC1.52□□□□□ -2.17
CDH4P55283 AP000560.1-201ENST00000624150 1937 ntBASIC1.52□□□□□ -2.17
CDH4P55283 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.52□□□□□ -2.17
CDH4P55283 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDH4P55283 ELL2P3-201ENST00000457883 1602 ntBASIC1.51□□□□□ -2.17
CDH4P55283 Y_RNA.480-201ENST00000384364 102 ntBASIC1.51□□□□□ -2.17
CDH4P55283 RNU6-434P-201ENST00000384376 107 ntBASIC1.51□□□□□ -2.17
CDH4P55283 Y_RNA.553-201ENST00000384670 102 ntBASIC1.51□□□□□ -2.17
CDH4P55283 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CDH4P55283 RNU6-903P-201ENST00000391270 109 ntBASIC1.51□□□□□ -2.17
CDH4P55283 AC068050.1-201ENST00000394891 380 ntBASIC1.51□□□□□ -2.17
CDH4P55283 RNU6-174P-201ENST00000410406 106 ntBASIC1.51□□□□□ -2.17
CDH4P55283 RNU2-29P-201ENST00000410423 189 ntBASIC1.51□□□□□ -2.17
CDH4P55283 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.51□□□□□ -2.17
CDH4P55283 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
CDH4P55283 SNRPEP8-201ENST00000442866 260 ntBASIC1.51□□□□□ -2.17
CDH4P55283 AC013470.1-201ENST00000453438 462 ntBASIC1.51□□□□□ -2.17
CDH4P55283 SCARNA18-201ENST00000459004 134 ntBASIC1.51□□□□□ -2.17
CDH4P55283 AC010409.1-201ENST00000487382 476 ntBASIC1.51□□□□□ -2.17
CDH4P55283 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.51□□□□□ -2.17
CDH4P55283 AK3P2-201ENST00000507976 429 ntBASIC1.51□□□□□ -2.17
CDH4P55283 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.51□□□□□ -2.17
CDH4P55283 AC105417.1-201ENST00000514691 285 ntBASIC1.51□□□□□ -2.17
CDH4P55283 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.51□□□□□ -2.17
CDH4P55283 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.51□□□□□ -2.17
CDH4P55283 AGGF1P4-201ENST00000568249 801 ntBASIC1.51□□□□□ -2.17
CDH4P55283 MTATP6P3-201ENST00000581686 676 ntBASIC1.51□□□□□ -2.17
CDH4P55283 AC012507.3-201ENST00000603556 477 ntBASIC1.51□□□□□ -2.17
CDH4P55283 AL391646.1-201ENST00000603860 190 ntBASIC1.51□□□□□ -2.17
CDH4P55283 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.51□□□□□ -2.17
CDH4P55283 AC002044.1-201ENST00000606707 158 ntBASIC1.51□□□□□ -2.17
CDH4P55283 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDH4P55283 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CDH4P55283 Y_RNA.77-201ENST00000362962 107 ntBASIC1.5□□□□□ -2.17
CDH4P55283 RNU6-438P-201ENST00000365561 103 ntBASIC1.5□□□□□ -2.17
CDH4P55283 RNU6-338P-201ENST00000383888 105 ntBASIC1.5□□□□□ -2.17
CDH4P55283 RNU6-1103P-201ENST00000384150 107 ntBASIC1.5□□□□□ -2.17
CDH4P55283 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CDH4P55283 RN7SKP51-201ENST00000410781 304 ntBASIC1.5□□□□□ -2.17
CDH4P55283 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH4P55283 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH4P55283 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH4P55283 AC123900.1-201ENST00000420390 96 ntBASIC1.5□□□□□ -2.17
CDH4P55283 MTATP6P17-201ENST00000431030 672 ntBASIC1.5□□□□□ -2.17
CDH4P55283 AC098826.2-201ENST00000452011 651 ntBASIC1.5□□□□□ -2.17
CDH4P55283 Y_RNA.638-201ENST00000459374 113 ntBASIC1.5□□□□□ -2.17
CDH4P55283 AC079382.1-201ENST00000493346 557 ntBASIC1.5□□□□□ -2.17
CDH4P55283 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH4P55283 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.5□□□□□ -2.17
CDH4P55283 AC087441.2-201ENST00000529141 262 ntBASIC1.5□□□□□ -2.17
CDH4P55283 AC103996.1-201ENST00000555468 102 ntBASIC1.5□□□□□ -2.17
CDH4P55283 MIR3923-201ENST00000579521 83 ntBASIC1.5□□□□□ -2.17
CDH4P55283 MIR5583-1-201ENST00000580941 59 ntBASIC1.5□□□□□ -2.17
CDH4P55283 RSL24D1P11-201ENST00000591045 491 ntBASIC1.5□□□□□ -2.17
CDH4P55283 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH4P55283 AL512598.1-201ENST00000610158 273 ntBASIC1.5□□□□□ -2.17
CDH4P55283 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH4P55283 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.5□□□□□ -2.17
CDH4P55283 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CDH4P55283 RNU6-552P-201ENST00000362869 119 ntBASIC1.49□□□□□ -2.17
CDH4P55283 RNU6-827P-201ENST00000365553 106 ntBASIC1.49□□□□□ -2.17
CDH4P55283 Y_RNA.399-201ENST00000383955 105 ntBASIC1.49□□□□□ -2.17
CDH4P55283 MTCYBP2-201ENST00000407745 171 ntBASIC1.49□□□□□ -2.17
CDH4P55283 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.49□□□□□ -2.17
CDH4P55283 MTCO2P19-201ENST00000427513 598 ntBASIC1.49□□□□□ -2.17
CDH4P55283 RNU1-131P-201ENST00000458943 161 ntBASIC1.49□□□□□ -2.17
CDH4P55283 AC005908.1-201ENST00000468701 347 ntBASIC1.49□□□□□ -2.17
CDH4P55283 AC021146.2-201ENST00000504736 556 ntBASIC1.49□□□□□ -2.17
CDH4P55283 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH4P55283 AC079140.3-201ENST00000511111 550 ntBASIC1.49□□□□□ -2.17
CDH4P55283 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH4P55283 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH4P55283 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH4P55283 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH4P55283 SUB1P4-201ENST00000566062 339 ntBASIC1.49□□□□□ -2.17
CDH4P55283 MIR5094-201ENST00000578766 85 ntBASIC1.49□□□□□ -2.17
CDH4P55283 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH4P55283 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.49□□□□□ -2.17
CDH4P55283 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.49□□□□□ -2.17
CDH4P55283 MIR8074-201ENST00000615081 81 ntBASIC1.49□□□□□ -2.17
CDH4P55283 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
CDH4P55283 AC005609.4-201ENST00000625071 447 ntBASIC1.49□□□□□ -2.17
CDH4P55283 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CDH4P55283 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CDH4P55283 U8.1-201ENST00000362843 134 ntBASIC1.48□□□□□ -2.17
CDH4P55283 SNORD32A-201ENST00000364805 84 ntBASIC1.48□□□□□ -2.17
CDH4P55283 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
CDH4P55283 RPS29P13-201ENST00000402041 169 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms