Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 SNORA46.1-201ENST00000391069 153 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 RNU2-40P-201ENST00000410833 196 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.84□□□□□ -2.11
EFNA3P52797 CYCSP49-201ENST00000420810 319 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 RPS15AP10-201ENST00000432472 382 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.84□□□□□ -2.11
EFNA3P52797 AC018868.1-201ENST00000491307 315 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.84□□□□□ -2.11
EFNA3P52797 AC025465.4-201ENST00000513422 638 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 RNU6-965P-201ENST00000516721 96 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 SNORA48.11-201ENST00000517015 89 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 AC109329.1-201ENST00000518744 317 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.84□□□□□ -2.11
EFNA3P52797 COPS8P3-201ENST00000526024 482 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 AC110588.1-201ENST00000559699 137 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.84□□□□□ -2.11
EFNA3P52797 AC060780.3-201ENST00000589464 80 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 MIR6845-201ENST00000613182 61 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 AC098657.3-201ENST00000620434 263 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 AC090617.10-201ENST00000624308 134 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 AC002543.1-201ENST00000299783 1954 ntBASIC1.84□□□□□ -2.11
EFNA3P52797 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
EFNA3P52797 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
EFNA3P52797 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
EFNA3P52797 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
EFNA3P52797 Y_RNA.86-201ENST00000363020 111 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 RNU6-254P-201ENST00000363377 107 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 Y_RNA.167-201ENST00000363735 109 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 RNU6-944P-201ENST00000364023 107 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
EFNA3P52797 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
EFNA3P52797 RNU6-128P-201ENST00000383976 107 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 Y_RNA.414-201ENST00000384011 101 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 SNORA32.2-201ENST00000384049 122 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 RNU6-1013P-201ENST00000384180 107 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 MIR95-201ENST00000385072 81 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 MIR561-201ENST00000385216 97 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 USP9YP28-201ENST00000435142 589 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.83□□□□□ -2.12
EFNA3P52797 AC243964.1-201ENST00000441814 261 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 RNA5SP233-201ENST00000459153 113 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 AC069439.1-201ENST00000494739 167 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 AC008628.2-201ENST00000502605 298 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 PRDX4P1-201ENST00000507189 574 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 FAM206BP-201ENST00000510179 541 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 RNU6-1332P-201ENST00000516666 104 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 RNU6-548P-201ENST00000517083 115 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 RNU6-1314P-201ENST00000517139 104 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.83□□□□□ -2.12
EFNA3P52797 AC118273.2-201ENST00000532092 465 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 AC091135.1-201ENST00000585943 307 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 AL161423.1-201ENST00000613700 262 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 AL162373.1-201ENST00000620433 407 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 AC091932.3-201ENST00000624223 323 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 AC009033.1-201ENST00000624279 431 ntBASIC1.83□□□□□ -2.12
EFNA3P52797 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
EFNA3P52797 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.82□□□□□ -2.12
EFNA3P52797 RNU6-1252P-201ENST00000363054 104 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 SNORD115-3-201ENST00000363100 82 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 RNU6-743P-201ENST00000364151 106 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 RNU6-1329P-201ENST00000365664 107 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 SNORD73A-201ENST00000386062 65 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 RNU6-876P-201ENST00000391295 104 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 RNU2-20P-201ENST00000410425 191 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.82□□□□□ -2.12
EFNA3P52797 EDDM3CP-201ENST00000415977 425 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 AL117339.3-201ENST00000418733 162 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.82□□□□□ -2.12
EFNA3P52797 MTND4LP16-201ENST00000440828 295 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 MTCO2P3-201ENST00000442543 421 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 RNU6-717P-201ENST00000459076 104 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 RNU6-1037P-201ENST00000459571 107 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 AC025033.1-201ENST00000463883 194 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 RPS29P11-201ENST00000496507 171 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 AC018710.1-201ENST00000506509 158 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.82□□□□□ -2.12
EFNA3P52797 RNU6-295P-201ENST00000516901 104 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 RNU6-667P-201ENST00000517186 102 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.82□□□□□ -2.12
EFNA3P52797 AC026371.1-201ENST00000551867 419 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 AC233702.2-202ENST00000562547 291 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 AP001094.1-201ENST00000579805 193 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 AC018638.8-201ENST00000588755 281 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 ELOCP5-201ENST00000604924 333 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 CTHRC1P1-201ENST00000605383 469 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
EFNA3P52797 AL159153.1-201ENST00000619688 317 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 uc_338.20-201ENST00000621563 178 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 CASC19-280ENST00000642102 1351 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 MTND4P1-201ENST00000457501 1466 ntBASIC1.82□□□□□ -2.12
EFNA3P52797 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
EFNA3P52797 AC009487.4-201ENST00000624969 3585 ntBASIC1.81□□□□□ -2.12
EFNA3P52797 Y_RNA.72-201ENST00000362894 103 ntBASIC1.81□□□□□ -2.12
EFNA3P52797 RNU6-510P-201ENST00000391239 108 ntBASIC1.81□□□□□ -2.12
EFNA3P52797 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.81□□□□□ -2.12
EFNA3P52797 CBX3P9-201ENST00000402326 552 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms