Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.66□□□□□ -1.82
CCNFP41002 Y_RNA.40-201ENST00000362645 93 ntBASIC3.66□□□□□ -1.82
CCNFP41002 Y_RNA.446-201ENST00000384178 104 ntBASIC3.66□□□□□ -1.82
CCNFP41002 Y_RNA.555-201ENST00000384673 110 ntBASIC3.66□□□□□ -1.82
CCNFP41002 MIR767-201ENST00000390228 109 ntBASIC3.66□□□□□ -1.82
CCNFP41002 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCNFP41002 RNA5SP354-201ENST00000391247 136 ntBASIC3.66□□□□□ -1.82
CCNFP41002 AP001324.2-201ENST00000461163 319 ntBASIC3.66□□□□□ -1.82
CCNFP41002 AC112771.1-201ENST00000463581 102 ntBASIC3.66□□□□□ -1.82
CCNFP41002 AC091179.3-201ENST00000474761 144 ntBASIC3.66□□□□□ -1.82
CCNFP41002 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.66□□□□□ -1.82
CCNFP41002 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCNFP41002 AL137100.2-201ENST00000555786 315 ntBASIC3.66□□□□□ -1.82
CCNFP41002 AC055872.1-201ENST00000570978 278 ntBASIC3.66□□□□□ -1.82
CCNFP41002 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.66□□□□□ -1.82
CCNFP41002 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.66□□□□□ -1.82
CCNFP41002 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.66□□□□□ -1.82
CCNFP41002 SNRPGP20-201ENST00000604477 205 ntBASIC3.66□□□□□ -1.82
CCNFP41002 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCNFP41002 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCNFP41002 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCNFP41002 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
CCNFP41002 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
CCNFP41002 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCNFP41002 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.66□□□□□ -1.82
CCNFP41002 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCNFP41002 MIR410-201ENST00000362222 80 ntBASIC3.65□□□□□ -1.83
CCNFP41002 MIR411-201ENST00000362239 96 ntBASIC3.65□□□□□ -1.83
CCNFP41002 MIR548M-201ENST00000408260 86 ntBASIC3.65□□□□□ -1.83
CCNFP41002 RNU6-651P-201ENST00000411040 105 ntBASIC3.65□□□□□ -1.83
CCNFP41002 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNFP41002 CYCSP48-201ENST00000417124 323 ntBASIC3.65□□□□□ -1.83
CCNFP41002 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNFP41002 ARF4P2-201ENST00000430209 526 ntBASIC3.65□□□□□ -1.83
CCNFP41002 AL133162.1-201ENST00000463228 453 ntBASIC3.65□□□□□ -1.83
CCNFP41002 AC007215.1-201ENST00000464893 276 ntBASIC3.65□□□□□ -1.83
CCNFP41002 SNORD116-28-201ENST00000516123 91 ntBASIC3.65□□□□□ -1.83
CCNFP41002 RNU6-107P-201ENST00000516643 102 ntBASIC3.65□□□□□ -1.83
CCNFP41002 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.65□□□□□ -1.83
CCNFP41002 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.65□□□□□ -1.83
CCNFP41002 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.65□□□□□ -1.83
CCNFP41002 AC233702.2-202ENST00000562547 291 ntBASIC3.65□□□□□ -1.83
CCNFP41002 AC006130.2-201ENST00000586202 326 ntBASIC3.65□□□□□ -1.83
CCNFP41002 AL512605.2-201ENST00000592972 256 ntBASIC3.65□□□□□ -1.83
CCNFP41002 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCNFP41002 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CCNFP41002 AP000553.6-201ENST00000641242 118 ntBASIC3.65□□□□□ -1.83
CCNFP41002 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCNFP41002 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.65□□□□□ -1.83
CCNFP41002 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCNFP41002 Y_RNA.292-201ENST00000364904 97 ntBASIC3.64□□□□□ -1.83
CCNFP41002 SNORA62.3-201ENST00000365110 153 ntBASIC3.64□□□□□ -1.83
CCNFP41002 AP002088.1-201ENST00000382740 395 ntBASIC3.64□□□□□ -1.83
CCNFP41002 MIR554-201ENST00000384874 96 ntBASIC3.64□□□□□ -1.83
CCNFP41002 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCNFP41002 RN7SKP202-201ENST00000410439 330 ntBASIC3.64□□□□□ -1.83
CCNFP41002 RNU2-61P-201ENST00000411069 191 ntBASIC3.64□□□□□ -1.83
CCNFP41002 RPL19P1-201ENST00000411635 428 ntBASIC3.64□□□□□ -1.83
CCNFP41002 MTCO1P5-201ENST00000433573 344 ntBASIC3.64□□□□□ -1.83
CCNFP41002 AC091959.1-201ENST00000495857 238 ntBASIC3.64□□□□□ -1.83
CCNFP41002 RNU6-579P-201ENST00000516879 102 ntBASIC3.64□□□□□ -1.83
CCNFP41002 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.64□□□□□ -1.83
CCNFP41002 AC004467.1-201ENST00000615678 330 ntBASIC3.64□□□□□ -1.83
CCNFP41002 AC022149.2-201ENST00000621061 203 ntBASIC3.64□□□□□ -1.83
CCNFP41002 AC018692.3-201ENST00000623929 123 ntBASIC3.64□□□□□ -1.83
CCNFP41002 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.64□□□□□ -1.83
CCNFP41002 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCNFP41002 MAPK10-322ENST00000641485 4530 ntBASIC3.64□□□□□ -1.83
CCNFP41002 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.64□□□□□ -1.83
CCNFP41002 AC092593.1-201ENST00000515413 1815 ntBASIC3.63□□□□□ -1.83
CCNFP41002 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCNFP41002 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCNFP41002 SNORA18.3-201ENST00000384122 132 ntBASIC3.63□□□□□ -1.83
CCNFP41002 RNU1-101P-201ENST00000391171 127 ntBASIC3.63□□□□□ -1.83
CCNFP41002 Y_RNA.626-201ENST00000411288 95 ntBASIC3.63□□□□□ -1.83
CCNFP41002 RAB28P5-201ENST00000427490 651 ntBASIC3.63□□□□□ -1.83
CCNFP41002 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.63□□□□□ -1.83
CCNFP41002 IFNA11P-201ENST00000446352 526 ntBASIC3.63□□□□□ -1.83
CCNFP41002 AC007395.1-201ENST00000451333 677 ntBASIC3.63□□□□□ -1.83
CCNFP41002 AC005042.3-201ENST00000453230 174 ntBASIC3.63□□□□□ -1.83
CCNFP41002 RPS27P26-201ENST00000494583 239 ntBASIC3.63□□□□□ -1.83
CCNFP41002 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.63□□□□□ -1.83
CCNFP41002 AC110768.1-201ENST00000509222 400 ntBASIC3.63□□□□□ -1.83
CCNFP41002 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.63□□□□□ -1.83
CCNFP41002 AC074133.1-201ENST00000515696 183 ntBASIC3.63□□□□□ -1.83
CCNFP41002 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.63□□□□□ -1.83
CCNFP41002 CYCSP23-201ENST00000519781 313 ntBASIC3.63□□□□□ -1.83
CCNFP41002 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNFP41002 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNFP41002 AP002392.1-201ENST00000537692 208 ntBASIC3.63□□□□□ -1.83
CCNFP41002 TGIF1P1-201ENST00000558095 802 ntBASIC3.63□□□□□ -1.83
CCNFP41002 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.63□□□□□ -1.83
CCNFP41002 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNFP41002 MIR6075-201ENST00000620782 95 ntBASIC3.63□□□□□ -1.83
CCNFP41002 AC091932.3-201ENST00000624223 323 ntBASIC3.63□□□□□ -1.83
CCNFP41002 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCNFP41002 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCNFP41002 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNFP41002 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.62□□□□□ -1.83
CCNFP41002 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms