Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AL133173.2-201ENST00000614270 90 ntBASIC1.02□□□□□ -2.25
COL18A1P39060 RMST_4.1-201ENST00000616886 107 ntBASIC1.02□□□□□ -2.25
COL18A1P39060 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.02□□□□□ -2.25
COL18A1P39060 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.02□□□□□ -2.25
COL18A1P39060 AC007671.2-201ENST00000637344 619 ntBASIC1.02□□□□□ -2.25
COL18A1P39060 RNU6-78P-201ENST00000362897 107 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 RNU5F-6P-201ENST00000362979 116 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 RNU6-23P-201ENST00000363283 107 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 SNORA20.2-201ENST00000383922 131 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 RNU2-3P-201ENST00000410144 191 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 EEF1A1P40-201ENST00000412883 573 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.01□□□□□ -2.25
COL18A1P39060 C1DP2-201ENST00000418167 426 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.01□□□□□ -2.25
COL18A1P39060 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL18A1P39060 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.01□□□□□ -2.25
COL18A1P39060 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.01□□□□□ -2.25
COL18A1P39060 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.01□□□□□ -2.25
COL18A1P39060 USP9YP12-201ENST00000450481 570 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.01□□□□□ -2.25
COL18A1P39060 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.01□□□□□ -2.25
COL18A1P39060 AC008269.2-201ENST00000561915 1105 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.01□□□□□ -2.25
COL18A1P39060 MIR3136-201ENST00000583498 78 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AC138649.3-201ENST00000622154 254 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AC019226.2-201ENST00000625973 424 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 U6.114-201ENST00000636407 96 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 MIR6086-201ENST00000638065 55 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL18A1P39060 RNU6-1214P-201ENST00000363650 109 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 RNU4-56P-201ENST00000364700 142 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 Y_RNA.324-201ENST00000365165 102 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 Y_RNA.576-201ENST00000384781 102 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
COL18A1P39060 RNU6-360P-201ENST00000390944 104 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 RNU6-293P-201ENST00000411259 106 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.01□□□□□ -2.25
COL18A1P39060 AC098934.3-201ENST00000430450 190 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.01□□□□□ -2.25
COL18A1P39060 HSPE1P24-201ENST00000450782 238 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AC079140.5-201ENST00000507882 310 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.01□□□□□ -2.25
COL18A1P39060 RNU6-685P-201ENST00000517088 95 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AL356057.1-201ENST00000533798 831 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.01□□□□□ -2.25
COL18A1P39060 MIR3169-201ENST00000578032 83 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.01□□□□□ -2.25
COL18A1P39060 AL356157.2-201ENST00000605122 111 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 Z99289.3-201ENST00000605586 594 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AC016597.2-201ENST00000613256 341 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 AC022960.3-201ENST00000619794 441 ntBASIC1.01□□□□□ -2.25
COL18A1P39060 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
COL18A1P39060 Y_RNA.67-201ENST00000362870 100 ntBASIC1□□□□□ -2.25
COL18A1P39060 Y_RNA.332-201ENST00000365271 113 ntBASIC1□□□□□ -2.25
COL18A1P39060 RNU6-116P-201ENST00000384042 109 ntBASIC1□□□□□ -2.25
COL18A1P39060 RNU6-35P-201ENST00000384530 107 ntBASIC1□□□□□ -2.25
COL18A1P39060 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1□□□□□ -2.25
COL18A1P39060 TRAPPC2P8-201ENST00000440676 396 ntBASIC1□□□□□ -2.25
COL18A1P39060 AC243964.1-201ENST00000441814 261 ntBASIC1□□□□□ -2.25
COL18A1P39060 TRAPPC2P3-201ENST00000443200 321 ntBASIC1□□□□□ -2.25
COL18A1P39060 snoU13.9-201ENST00000458927 103 ntBASIC1□□□□□ -2.25
COL18A1P39060 RNU1-131P-201ENST00000458943 161 ntBASIC1□□□□□ -2.25
COL18A1P39060 HMGN1P13-201ENST00000505795 138 ntBASIC1□□□□□ -2.25
COL18A1P39060 TPT1P8-201ENST00000510120 555 ntBASIC1□□□□□ -2.25
COL18A1P39060 AC005741.1-201ENST00000511094 432 ntBASIC1□□□□□ -2.25
COL18A1P39060 RNVU1-2-201ENST00000516326 135 ntBASIC1□□□□□ -2.25
COL18A1P39060 AC133485.1-201ENST00000567176 124 ntBASIC1□□□□□ -2.25
COL18A1P39060 AC138907.6-201ENST00000568401 126 ntBASIC1□□□□□ -2.25
COL18A1P39060 AL590229.1-201ENST00000603497 542 ntBASIC1□□□□□ -2.25
COL18A1P39060 Z69720.2-201ENST00000624755 279 ntBASIC1□□□□□ -2.25
COL18A1P39060 AC008163.1-202ENST00000636004 2889 ntBASIC1□□□□□ -2.25
COL18A1P39060 LINC02555-201ENST00000563933 1951 ntBASIC1□□□□□ -2.25
COL18A1P39060 RNA5SP499-201ENST00000363982 119 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 RNU6-338P-201ENST00000383888 105 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 MIR1197-201ENST00000408818 88 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 Z99497.1-201ENST00000421282 135 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.99□□□□□ -2.25
COL18A1P39060 MTATP6P16-201ENST00000434543 526 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 SNORA3.4-201ENST00000515969 96 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 AC109479.2-201ENST00000517842 174 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.99□□□□□ -2.25
COL18A1P39060 AC022616.3-201ENST00000523940 148 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 COPS8P3-201ENST00000526024 482 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 AC109446.1-201ENST00000566172 220 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.99□□□□□ -2.25
COL18A1P39060 MIR3682-201ENST00000581338 84 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
COL18A1P39060 uc_338.11-201ENST00000619132 160 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 MIR6835-201ENST00000621552 64 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 AC068787.1-201ENST00000623908 691 ntBASIC0.99□□□□□ -2.25
COL18A1P39060 MIR424-201ENST00000362227 98 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU4-15P-201ENST00000362613 141 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-1287P-201ENST00000362914 107 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 SNORD115-7-201ENST00000365306 82 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-169P-201ENST00000365336 107 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-438P-201ENST00000365561 103 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 SNORD26-201ENST00000384147 75 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-1060P-201ENST00000384664 107 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 AC078809.1-201ENST00000427601 140 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RPL31P35-201ENST00000431058 377 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms