Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 Y_RNA.123-201ENST00000363338 102 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 Y_RNA.128-201ENST00000363391 112 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 Y_RNA.197-201ENST00000364004 102 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 RNU6-843P-201ENST00000384454 104 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 RNU6-692P-201ENST00000384496 107 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 Y_RNA.508-201ENST00000384502 114 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 SNORA41-201ENST00000384675 132 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 RNU6-174P-201ENST00000410406 106 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.02□□□□□ -1.93
COL15A1P39059 AC243964.1-201ENST00000441814 261 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 AC009296.1-201ENST00000443146 155 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.02□□□□□ -1.93
COL15A1P39059 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.02□□□□□ -1.93
COL15A1P39059 SNORA31.23-201ENST00000517219 133 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 SNORA31.26-201ENST00000517250 137 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.02□□□□□ -1.93
COL15A1P39059 AP001836.1-201ENST00000604675 523 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 AC002064.3-201ENST00000623448 346 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL15A1P39059 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.02□□□□□ -1.93
COL15A1P39059 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL15A1P39059 RBBP8P1-201ENST00000449447 1844 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 HAUS6P2-201ENST00000433254 2404 ntBASIC3.02□□□□□ -1.93
COL15A1P39059 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.02□□□□□ -1.93
COL15A1P39059 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.02□□□□□ -1.93
COL15A1P39059 SNORD42.2-201ENST00000365570 69 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 RNU6-748P-201ENST00000384648 107 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 MIR544A-201ENST00000384855 91 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 AP000275.1-201ENST00000411943 390 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 AL365496.1-201ENST00000426885 215 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 Y_RNA.639-201ENST00000458981 102 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 Y_RNA.631-201ENST00000459607 101 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 AC068781.1-201ENST00000488231 618 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 AC022493.2-201ENST00000506122 481 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 RNU6-470P-201ENST00000515954 104 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.01□□□□□ -1.93
COL15A1P39059 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.01□□□□□ -1.93
COL15A1P39059 HMGB1P24-202ENST00000615653 685 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 AC099654.10-201ENST00000640395 161 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL15A1P39059 AC008669.1-201ENST00000565823 2178 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 MTND5P9-201ENST00000503854 1755 ntBASIC3.01□□□□□ -1.93
COL15A1P39059 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL15A1P39059 MIR548P-201ENST00000408336 84 ntBASIC3□□□□□ -1.93
COL15A1P39059 AC138623.1-201ENST00000418060 216 ntBASIC3□□□□□ -1.93
COL15A1P39059 AL353997.1-201ENST00000432936 108 ntBASIC3□□□□□ -1.93
COL15A1P39059 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3□□□□□ -1.93
COL15A1P39059 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3□□□□□ -1.93
COL15A1P39059 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3□□□□□ -1.93
COL15A1P39059 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3□□□□□ -1.93
COL15A1P39059 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3□□□□□ -1.93
COL15A1P39059 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3□□□□□ -1.93
COL15A1P39059 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
COL15A1P39059 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
COL15A1P39059 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL15A1P39059 RNU1-91P-201ENST00000364746 163 ntBASIC3□□□□□ -1.93
COL15A1P39059 MIR559-201ENST00000385188 96 ntBASIC3□□□□□ -1.93
COL15A1P39059 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3□□□□□ -1.93
COL15A1P39059 AL133475.1-201ENST00000404414 305 ntBASIC3□□□□□ -1.93
COL15A1P39059 AL590004.1-201ENST00000405321 300 ntBASIC3□□□□□ -1.93
COL15A1P39059 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL15A1P39059 EIF4EP2-201ENST00000422816 654 ntBASIC3□□□□□ -1.93
COL15A1P39059 AC007969.2-201ENST00000441891 191 ntBASIC3□□□□□ -1.93
COL15A1P39059 RPS29P27-201ENST00000463711 170 ntBASIC3□□□□□ -1.93
COL15A1P39059 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3□□□□□ -1.93
COL15A1P39059 RPL36AP21-201ENST00000490372 323 ntBASIC3□□□□□ -1.93
COL15A1P39059 Y_RNA.661-201ENST00000516003 99 ntBASIC3□□□□□ -1.93
COL15A1P39059 RNU6-976P-201ENST00000516086 111 ntBASIC3□□□□□ -1.93
COL15A1P39059 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3□□□□□ -1.93
COL15A1P39059 CBX3P8-201ENST00000532412 525 ntBASIC3□□□□□ -1.93
COL15A1P39059 SNRPGP18-201ENST00000553000 214 ntBASIC3□□□□□ -1.93
COL15A1P39059 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3□□□□□ -1.93
COL15A1P39059 AC105137.2-201ENST00000569073 466 ntBASIC3□□□□□ -1.93
COL15A1P39059 MIR5007-201ENST00000583098 95 ntBASIC3□□□□□ -1.93
COL15A1P39059 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL15A1P39059 AC092881.1-201ENST00000638218 2733 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 AC009487.4-201ENST00000624969 3585 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 RNU6-490P-201ENST00000362985 107 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 RNU6-474P-201ENST00000384243 107 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 Y_RNA.533-201ENST00000384596 114 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL15A1P39059 RNA5SP390-201ENST00000410191 113 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.99□□□□□ -1.93
COL15A1P39059 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.99□□□□□ -1.93
COL15A1P39059 RPL30P12-201ENST00000474666 353 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 AP003072.1-201ENST00000531740 145 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.99□□□□□ -1.93
COL15A1P39059 MIR3171-201ENST00000584270 74 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.99□□□□□ -1.93
COL15A1P39059 AL391813.1-201ENST00000603098 260 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 7SK.7-201ENST00000603504 247 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 AC096772.1-201ENST00000609146 564 ntBASIC2.99□□□□□ -1.93
COL15A1P39059 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL15A1P39059 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL15A1P39059 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.98□□□□□ -1.93
COL15A1P39059 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.98□□□□□ -1.93
COL15A1P39059 SNORA25.6-201ENST00000364121 118 ntBASIC2.98□□□□□ -1.93
COL15A1P39059 Y_RNA.269-201ENST00000364685 89 ntBASIC2.98□□□□□ -1.93
COL15A1P39059 RNU6-487P-201ENST00000365430 104 ntBASIC2.98□□□□□ -1.93
COL15A1P39059 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms