Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SNORD116-28-201ENST00000516123 91 ntBASIC3.96□□□□□ -1.78
PDE6BP35913 RNU6-346P-201ENST00000516288 111 ntBASIC3.96□□□□□ -1.78
PDE6BP35913 AC107934.2-201ENST00000518653 310 ntBASIC3.96□□□□□ -1.78
PDE6BP35913 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.96□□□□□ -1.78
PDE6BP35913 MIR4659A-201ENST00000580269 81 ntBASIC3.96□□□□□ -1.78
PDE6BP35913 MIR3162-201ENST00000581818 82 ntBASIC3.96□□□□□ -1.78
PDE6BP35913 AC060766.3-201ENST00000591442 263 ntBASIC3.96□□□□□ -1.78
PDE6BP35913 AC008121.1-201ENST00000603244 268 ntBASIC3.96□□□□□ -1.78
PDE6BP35913 MZT1P2-201ENST00000604387 248 ntBASIC3.96□□□□□ -1.78
PDE6BP35913 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDE6BP35913 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.95□□□□□ -1.78
PDE6BP35913 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDE6BP35913 FTLP6-201ENST00000355274 422 ntBASIC3.95□□□□□ -1.78
PDE6BP35913 RNU6-227P-201ENST00000362865 103 ntBASIC3.95□□□□□ -1.78
PDE6BP35913 RNY1P5-201ENST00000383890 115 ntBASIC3.95□□□□□ -1.78
PDE6BP35913 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.95□□□□□ -1.78
PDE6BP35913 RNU6-651P-201ENST00000411040 105 ntBASIC3.95□□□□□ -1.78
PDE6BP35913 AL139281.1-201ENST00000422120 335 ntBASIC3.95□□□□□ -1.78
PDE6BP35913 AL358453.1-201ENST00000422522 250 ntBASIC3.95□□□□□ -1.78
PDE6BP35913 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.95□□□□□ -1.78
PDE6BP35913 ARF4P2-201ENST00000430209 526 ntBASIC3.95□□□□□ -1.78
PDE6BP35913 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.95□□□□□ -1.78
PDE6BP35913 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.95□□□□□ -1.78
PDE6BP35913 MIR2355-201ENST00000517199 87 ntBASIC3.95□□□□□ -1.78
PDE6BP35913 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.95□□□□□ -1.78
PDE6BP35913 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.95□□□□□ -1.78
PDE6BP35913 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.95□□□□□ -1.78
PDE6BP35913 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PDE6BP35913 AC007256.1-201ENST00000392253 2765 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PDE6BP35913 Y_RNA.123-201ENST00000363338 102 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 SNORA54-201ENST00000384281 123 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 MIR10A-201ENST00000385043 110 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 RNA5SP229-201ENST00000410809 99 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 EEF1A1P41-201ENST00000414667 207 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.94□□□□□ -1.78
PDE6BP35913 AC002075.2-201ENST00000425207 252 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 AL627311.1-201ENST00000431514 115 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 TOMM22P6-201ENST00000465035 409 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 RPS29P26-201ENST00000477483 171 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.94□□□□□ -1.78
PDE6BP35913 SEPT14P8-201ENST00000508026 178 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 Y_RNA.706-201ENST00000516933 99 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.94□□□□□ -1.78
PDE6BP35913 NDUFB9P3-201ENST00000521269 501 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.94□□□□□ -1.78
PDE6BP35913 GTF3AP2-201ENST00000557014 266 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDE6BP35913 AC090617.3-201ENST00000573670 475 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.94□□□□□ -1.78
PDE6BP35913 AC010928.2-201ENST00000588017 287 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 Z83818.1-201ENST00000603584 150 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDE6BP35913 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.94□□□□□ -1.78
PDE6BP35913 HAUS6P2-201ENST00000433254 2404 ntBASIC3.94□□□□□ -1.78
PDE6BP35913 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
PDE6BP35913 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PDE6BP35913 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDE6BP35913 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 RNU6-222P-201ENST00000362438 107 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 Y_RNA.44-201ENST00000362676 108 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 RNU6-704P-201ENST00000364162 103 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 RNU6-740P-201ENST00000364734 105 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 Y_RNA.286-201ENST00000364813 102 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 RNU6-336P-201ENST00000364891 107 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 SNORD63-201ENST00000384262 68 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 Y_RNA.504-201ENST00000384481 104 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 SNORD15B-201ENST00000384714 146 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 SNORD78.2-201ENST00000391076 69 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 SNORA40C-201ENST00000391285 128 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.93□□□□□ -1.78
PDE6BP35913 RPL23AP82-202ENST00000427528 469 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.93□□□□□ -1.78
PDE6BP35913 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
PDE6BP35913 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.93□□□□□ -1.78
PDE6BP35913 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.93□□□□□ -1.78
PDE6BP35913 RPS4XP2-201ENST00000458402 793 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 COX6CP14-201ENST00000469580 174 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 RPS26P21-201ENST00000475397 348 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 AC010265.1-201ENST00000513509 211 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 RNU7-175P-201ENST00000515915 61 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 RNU6-1278P-201ENST00000516130 107 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 MTND5P41-201ENST00000517498 206 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 AC109479.2-201ENST00000517842 174 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.93□□□□□ -1.78
PDE6BP35913 uc_338.25-201ENST00000613756 156 ntBASIC3.93□□□□□ -1.78
PDE6BP35913 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PDE6BP35913 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PDE6BP35913 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDE6BP35913 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
PDE6BP35913 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PDE6BP35913 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.92□□□□□ -1.78
PDE6BP35913 Y_RNA.122-201ENST00000363331 96 ntBASIC3.92□□□□□ -1.78
PDE6BP35913 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.92□□□□□ -1.78
PDE6BP35913 RNU6-318P-201ENST00000384283 103 ntBASIC3.92□□□□□ -1.78
PDE6BP35913 RNU6-166P-201ENST00000384371 107 ntBASIC3.92□□□□□ -1.78
PDE6BP35913 MIR888-201ENST00000401186 77 ntBASIC3.92□□□□□ -1.78
PDE6BP35913 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.92□□□□□ -1.78
PDE6BP35913 RNU7-23P-201ENST00000459465 62 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms