Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HLA-DMAP28067 AC245060.5-201ENST00000610778 3293 ntBASIC1.16□□□□□ -2.22
HLA-DMAP28067 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
HLA-DMAP28067 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.15□□□□□ -2.22
HLA-DMAP28067 RNU6-1120P-201ENST00000362988 108 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 RNU6-271P-201ENST00000363858 105 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 Y_RNA.332-201ENST00000365271 113 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 RNU6-1158P-201ENST00000391167 107 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 MIR1267-201ENST00000408723 78 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 RNA5SP201-201ENST00000410316 124 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 RNU2-29P-201ENST00000410423 189 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.15□□□□□ -2.23
HLA-DMAP28067 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DMAP28067 SNRPFP3-201ENST00000457792 225 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 RNU7-180P-201ENST00000459240 63 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC130509.1-201ENST00000464158 433 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 RPS26P55-201ENST00000471178 356 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC022447.4-201ENST00000504053 364 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.15□□□□□ -2.23
HLA-DMAP28067 ARL2BPP4-201ENST00000506854 471 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC105417.1-201ENST00000514691 285 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 Y_RNA.695-201ENST00000516715 107 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 RNU6-295P-201ENST00000516901 104 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC109479.2-201ENST00000517842 174 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC115990.1-201ENST00000526957 301 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AL137161.1-201ENST00000532231 390 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC007834.2-201ENST00000536310 343 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AL391840.1-201ENST00000571144 367 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC005786.1-201ENST00000588553 154 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC011494.1-201ENST00000596454 237 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 NIFKP6-201ENST00000598115 845 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC121247.2-201ENST00000604776 136 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC087752.4-201ENST00000605911 462 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 RNU6-85P-201ENST00000605989 107 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AL050343.2-201ENST00000607338 280 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC072046.2-201ENST00000618366 268 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
HLA-DMAP28067 AC130454.1-201ENST00000622948 401 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 SNORA43.4-201ENST00000629559 138 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.15□□□□□ -2.23
HLA-DMAP28067 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HLA-DMAP28067 AP000560.1-201ENST00000624150 1937 ntBASIC1.15□□□□□ -2.23
HLA-DMAP28067 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
HLA-DMAP28067 Y_RNA.399-201ENST00000383955 105 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 RNU6-203P-201ENST00000384038 104 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 Y_RNA.480-201ENST00000384364 102 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 AL049545.1-201ENST00000401856 572 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 MTCYBP2-201ENST00000407745 171 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
HLA-DMAP28067 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DMAP28067 AL590556.1-201ENST00000423231 483 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 OOSP1P1-201ENST00000423265 274 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 RPL23AP95-201ENST00000426806 265 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 MTCO2P19-201ENST00000427513 598 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 MTCO1P19-201ENST00000443487 500 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.14□□□□□ -2.23
HLA-DMAP28067 AC073415.1-201ENST00000449240 153 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 AC022364.2-201ENST00000457963 554 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 RNU6-333P-201ENST00000459117 107 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 RNU6-1038P-201ENST00000516516 104 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 RNU6-1098P-201ENST00000516772 96 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 AP000889.1-201ENST00000530968 660 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 RRN3P3-201ENST00000549207 578 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 SNORA59B-202ENST00000578183 701 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 AP000654.2-201ENST00000605633 586 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 PCGEM1.1-201ENST00000613431 131 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 AL354950.2-201ENST00000617939 290 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 AP000770.2-201ENST00000623694 100 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
HLA-DMAP28067 LINC02555-201ENST00000563933 1951 ntBASIC1.14□□□□□ -2.23
HLA-DMAP28067 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 AP000568.1-201ENST00000282964 442 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 SNORD33-201ENST00000362761 85 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 RNU4-13P-201ENST00000364019 141 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 Y_RNA.359-201ENST00000365498 102 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HLA-DMAP28067 Y_RNA.504-201ENST00000384481 104 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 AC139712.2-201ENST00000424302 339 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 AL133396.1-201ENST00000432048 687 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 AL356010.1-201ENST00000456364 102 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 RNU7-167P-201ENST00000459160 62 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 TOMM22P6-201ENST00000465035 409 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 GMFBP1-201ENST00000467831 427 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 RPL30P7-201ENST00000479312 323 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 HMGN1P13-201ENST00000505795 138 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms