Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 Y_RNA.693-201ENST00000516641 110 ntBASIC1.67□□□□□ -2.14
RETP07949 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.67□□□□□ -2.14
RETP07949 AP004607.1-201ENST00000524456 203 ntBASIC1.67□□□□□ -2.14
RETP07949 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.67□□□□□ -2.14
RETP07949 AL512360.1-201ENST00000555346 234 ntBASIC1.67□□□□□ -2.14
RETP07949 MTCO3P23-201ENST00000561363 289 ntBASIC1.67□□□□□ -2.14
RETP07949 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.67□□□□□ -2.14
RETP07949 AC012557.2-201ENST00000605919 418 ntBASIC1.67□□□□□ -2.14
RETP07949 AC096772.1-201ENST00000609146 564 ntBASIC1.67□□□□□ -2.14
RETP07949 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.67□□□□□ -2.14
RETP07949 AC026585.1-201ENST00000619582 524 ntBASIC1.67□□□□□ -2.14
RETP07949 MIR6734-201ENST00000621166 68 ntBASIC1.67□□□□□ -2.14
RETP07949 AC097372.5-201ENST00000623665 376 ntBASIC1.67□□□□□ -2.14
RETP07949 SCARNA4-202ENST00000625402 129 ntBASIC1.67□□□□□ -2.14
RETP07949 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.67□□□□□ -2.14
RETP07949 AC006026.1-201ENST00000444025 1803 ntBASIC1.67□□□□□ -2.14
RETP07949 MTND5P35-201ENST00000557537 1720 ntBASIC1.66□□□□□ -2.14
RETP07949 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RETP07949 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RETP07949 RNU1-42P-201ENST00000364033 160 ntBASIC1.66□□□□□ -2.14
RETP07949 RNU6-1303P-201ENST00000364841 107 ntBASIC1.66□□□□□ -2.14
RETP07949 Y_RNA.324-201ENST00000365165 102 ntBASIC1.66□□□□□ -2.14
RETP07949 Y_RNA.372-201ENST00000365599 102 ntBASIC1.66□□□□□ -2.14
RETP07949 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
RETP07949 SNORA69-201ENST00000383895 132 ntBASIC1.66□□□□□ -2.14
RETP07949 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
RETP07949 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RETP07949 AL606923.1-201ENST00000406616 190 ntBASIC1.66□□□□□ -2.14
RETP07949 MTND1P34-201ENST00000438556 671 ntBASIC1.66□□□□□ -2.14
RETP07949 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.66□□□□□ -2.14
RETP07949 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.66□□□□□ -2.14
RETP07949 AC006026.2-201ENST00000457376 180 ntBASIC1.66□□□□□ -2.14
RETP07949 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.66□□□□□ -2.14
RETP07949 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.66□□□□□ -2.14
RETP07949 RNU6-314P-201ENST00000516574 104 ntBASIC1.66□□□□□ -2.14
RETP07949 SNORA43.2-201ENST00000516652 128 ntBASIC1.66□□□□□ -2.14
RETP07949 RNU6-835P-201ENST00000516974 104 ntBASIC1.66□□□□□ -2.14
RETP07949 MTND4P7-201ENST00000523876 130 ntBASIC1.66□□□□□ -2.14
RETP07949 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.66□□□□□ -2.14
RETP07949 AC016957.1-201ENST00000534895 309 ntBASIC1.66□□□□□ -2.14
RETP07949 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.66□□□□□ -2.14
RETP07949 CR383656.8-201ENST00000549046 145 ntBASIC1.66□□□□□ -2.14
RETP07949 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.66□□□□□ -2.14
RETP07949 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.66□□□□□ -2.14
RETP07949 HMGB1P33-201ENST00000563485 527 ntBASIC1.66□□□□□ -2.14
RETP07949 MIR5583-1-201ENST00000580941 59 ntBASIC1.66□□□□□ -2.14
RETP07949 MIR4424-201ENST00000585257 86 ntBASIC1.66□□□□□ -2.14
RETP07949 AF250324.2-201ENST00000608299 610 ntBASIC1.66□□□□□ -2.14
RETP07949 uc_338.15-201ENST00000615470 191 ntBASIC1.66□□□□□ -2.14
RETP07949 RMST_2.1-201ENST00000617263 136 ntBASIC1.66□□□□□ -2.14
RETP07949 uc_338.34-201ENST00000617467 174 ntBASIC1.66□□□□□ -2.14
RETP07949 MIR3529-201ENST00000637713 78 ntBASIC1.66□□□□□ -2.14
RETP07949 MTND4P23-201ENST00000447723 1363 ntBASIC1.66□□□□□ -2.14
RETP07949 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.66□□□□□ -2.14
RETP07949 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.65□□□□□ -2.14
RETP07949 RNU6-212P-201ENST00000362642 104 ntBASIC1.65□□□□□ -2.15
RETP07949 SNORD115-3-201ENST00000363100 82 ntBASIC1.65□□□□□ -2.15
RETP07949 RNY1-201ENST00000364228 113 ntBASIC1.65□□□□□ -2.15
RETP07949 RNU6-60P-201ENST00000364792 103 ntBASIC1.65□□□□□ -2.15
RETP07949 RNU6-622P-201ENST00000384272 103 ntBASIC1.65□□□□□ -2.15
RETP07949 Y_RNA.480-201ENST00000384364 102 ntBASIC1.65□□□□□ -2.15
RETP07949 MIR561-201ENST00000385216 97 ntBASIC1.65□□□□□ -2.15
RETP07949 SNORD37.1-201ENST00000390968 65 ntBASIC1.65□□□□□ -2.15
RETP07949 RNU6-780P-201ENST00000391030 104 ntBASIC1.65□□□□□ -2.15
RETP07949 AC074117.2-201ENST00000417130 397 ntBASIC1.65□□□□□ -2.15
RETP07949 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.65□□□□□ -2.15
RETP07949 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.65□□□□□ -2.15
RETP07949 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.65□□□□□ -2.15
RETP07949 HSPE1P21-201ENST00000438283 308 ntBASIC1.65□□□□□ -2.15
RETP07949 AC079140.5-201ENST00000507882 310 ntBASIC1.65□□□□□ -2.15
RETP07949 AC008834.1-201ENST00000511612 175 ntBASIC1.65□□□□□ -2.15
RETP07949 RNA5SP102-201ENST00000516865 106 ntBASIC1.65□□□□□ -2.15
RETP07949 AC034114.1-201ENST00000520293 285 ntBASIC1.65□□□□□ -2.15
RETP07949 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.65□□□□□ -2.15
RETP07949 AL031274.2-201ENST00000599419 203 ntBASIC1.65□□□□□ -2.15
RETP07949 AL645939.4-201ENST00000604495 135 ntBASIC1.65□□□□□ -2.15
RETP07949 Z82243.1-201ENST00000609432 473 ntBASIC1.65□□□□□ -2.15
RETP07949 RMST_7.1-201ENST00000621935 268 ntBASIC1.65□□□□□ -2.15
RETP07949 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.65□□□□□ -2.15
RETP07949 RNU6-1010P-201ENST00000362757 107 ntBASIC1.64□□□□□ -2.15
RETP07949 U3.13-201ENST00000364804 214 ntBASIC1.64□□□□□ -2.15
RETP07949 RNU6-483P-201ENST00000384088 108 ntBASIC1.64□□□□□ -2.15
RETP07949 RNU6-1215P-201ENST00000384441 102 ntBASIC1.64□□□□□ -2.15
RETP07949 Y_RNA.516-201ENST00000384541 124 ntBASIC1.64□□□□□ -2.15
RETP07949 RNU6-1274P-201ENST00000384557 107 ntBASIC1.64□□□□□ -2.15
RETP07949 MIR181A1-201ENST00000385026 110 ntBASIC1.64□□□□□ -2.15
RETP07949 SNORA40.19-201ENST00000390846 128 ntBASIC1.64□□□□□ -2.15
RETP07949 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
RETP07949 AL590002.1-201ENST00000406554 418 ntBASIC1.64□□□□□ -2.15
RETP07949 RNU6-648P-201ENST00000410190 107 ntBASIC1.64□□□□□ -2.15
RETP07949 POLHP1-201ENST00000411806 470 ntBASIC1.64□□□□□ -2.15
RETP07949 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.64□□□□□ -2.15
RETP07949 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.64□□□□□ -2.15
RETP07949 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.64□□□□□ -2.15
RETP07949 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.64□□□□□ -2.15
RETP07949 AL365400.1-201ENST00000431854 640 ntBASIC1.64□□□□□ -2.15
RETP07949 RNU7-167P-201ENST00000459160 62 ntBASIC1.64□□□□□ -2.15
RETP07949 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.64□□□□□ -2.15
RETP07949 CCDC34P1-201ENST00000507441 517 ntBASIC1.64□□□□□ -2.15
RETP07949 AC096745.1-201ENST00000509945 370 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms