Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.12□□□□□ -1.91
COL3A1P02461 AL450472.1-202ENST00000637286 180 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 AC132825.6-201ENST00000638861 357 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 AC092881.1-201ENST00000638218 2733 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 Y_RNA.458-201ENST00000384240 102 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 MIR578-201ENST00000384828 96 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 MIR215-201ENST00000384858 110 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 RNA5SP56-201ENST00000410277 118 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 RNU2-33P-201ENST00000410344 192 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 Y_RNA.793-201ENST00000411222 111 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 AC104389.3-201ENST00000445629 235 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 AL360271.2-201ENST00000447710 161 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 NDUFB4P10-201ENST00000452541 359 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 HMGN2P13-201ENST00000476476 274 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.11□□□□□ -1.91
COL3A1P02461 ANXA2P1-201ENST00000505539 926 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 Y_RNA.703-201ENST00000516846 111 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 RNU6-143P-201ENST00000516942 93 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 RNU6-840P-201ENST00000517275 65 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 DEFB108E-201ENST00000524692 240 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.11□□□□□ -1.91
COL3A1P02461 MIR5701-3-201ENST00000578890 82 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 MIR3133-201ENST00000583157 78 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 MIR4512-201ENST00000583257 77 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 MIR5701-1-201ENST00000585138 82 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 AP000787.2-201ENST00000604432 568 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 MIR5701-2-201ENST00000615634 82 ntBASIC3.11□□□□□ -1.91
COL3A1P02461 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.11□□□□□ -1.91
COL3A1P02461 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL3A1P02461 Y_RNA.83-201ENST00000363005 113 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 SNORD81.1-201ENST00000363064 77 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 Y_RNA.277-201ENST00000364754 102 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 DYNLT3P1-201ENST00000378574 347 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 DEFA7P-201ENST00000382676 285 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 RNU6-187P-201ENST00000384139 106 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 RNU6-146P-201ENST00000384602 108 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 RNU6-1179P-201ENST00000384667 107 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 SNORD115-46-201ENST00000390982 71 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 RNU2-43P-201ENST00000410306 190 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 RNU4-53P-201ENST00000410828 140 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 RNU6-130P-201ENST00000411112 103 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 CYCSP33-201ENST00000414485 327 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 AL096701.2-201ENST00000416920 238 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 IFNA11P-201ENST00000446352 526 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 Y_RNA.644-201ENST00000459006 113 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 AC087190.1-201ENST00000484462 480 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 AC107032.1-201ENST00000485945 480 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 RPS23P5-201ENST00000495419 428 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 RNU6-1338P-201ENST00000516328 91 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 Y_RNA.674-201ENST00000516362 113 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 MIR6766-201ENST00000622641 72 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.1□□□□□ -1.91
COL3A1P02461 AP000560.1-201ENST00000624150 1937 ntBASIC3.1□□□□□ -1.91
COL3A1P02461 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL3A1P02461 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL3A1P02461 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL3A1P02461 RNU6-1155P-201ENST00000363554 107 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 RNU6-1317P-201ENST00000364582 104 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 Y_RNA.269-201ENST00000364685 89 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 Y_RNA.291-201ENST00000364886 113 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 Y_RNA.439-201ENST00000384119 94 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COL3A1P02461 MIR1298-201ENST00000408783 112 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.09□□□□□ -1.91
COL3A1P02461 AL139156.1-201ENST00000412785 841 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 AL445305.1-201ENST00000432577 575 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.09□□□□□ -1.91
COL3A1P02461 HIGD1AP2-201ENST00000446367 280 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 U8.21-201ENST00000459536 136 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 AC005951.2-201ENST00000576282 495 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 AC034102.8-201ENST00000615146 484 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 MTND5P9-201ENST00000503854 1755 ntBASIC3.09□□□□□ -1.91
COL3A1P02461 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
COL3A1P02461 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
COL3A1P02461 snoU2_19.2-201ENST00000363024 80 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
COL3A1P02461 RNU6-708P-201ENST00000384217 107 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 MIR521-1-201ENST00000384902 87 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
COL3A1P02461 RPS29P13-201ENST00000402041 169 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 MTCYBP2-201ENST00000407745 171 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 RNU4-78P-201ENST00000410940 126 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.09□□□□□ -1.92
COL3A1P02461 AC067942.3-201ENST00000512025 362 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.09□□□□□ -1.92
COL3A1P02461 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.09□□□□□ -1.92
COL3A1P02461 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 SNORA25.14-201ENST00000516481 132 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 RNA5SP281-201ENST00000516504 135 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 RNU6-1212P-201ENST00000517023 104 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.09□□□□□ -1.92
COL3A1P02461 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.09□□□□□ -1.92
COL3A1P02461 LINC02555-201ENST00000563933 1951 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 AC025281.1-201ENST00000567026 265 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 AC004852.3-201ENST00000614131 326 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 MIR376A1-201ENST00000616574 68 ntBASIC3.09□□□□□ -1.92
COL3A1P02461 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL3A1P02461 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL3A1P02461 Y_RNA.238-201ENST00000364441 102 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms