Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PDGFBP01127 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.07□□□□□ -2.08
PDGFBP01127 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.07□□□□□ -2.08
PDGFBP01127 USP9YP18-201ENST00000425912 695 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 MRPS10P2-201ENST00000431226 381 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 UBE2V1P8-201ENST00000437166 265 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.07□□□□□ -2.08
PDGFBP01127 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.07□□□□□ -2.08
PDGFBP01127 Y_RNA.654-201ENST00000497848 106 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 AC008628.2-201ENST00000502605 298 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 HMGB1P35-201ENST00000503360 598 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 RNA5SP182-201ENST00000516064 82 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.07□□□□□ -2.08
PDGFBP01127 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.07□□□□□ -2.08
PDGFBP01127 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.07□□□□□ -2.08
PDGFBP01127 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.07□□□□□ -2.08
PDGFBP01127 AC233702.2-202ENST00000562547 291 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 MIR3941-201ENST00000582572 103 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 MIR5692C1-201ENST00000585309 91 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 MIR3688-2-201ENST00000636963 87 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.07□□□□□ -2.08
PDGFBP01127 Y_RNA.256-201ENST00000364594 104 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 RNU6-546P-201ENST00000383991 107 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 MIR450B-201ENST00000401182 78 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 U3.40-201ENST00000408706 208 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.06□□□□□ -2.08
PDGFBP01127 MTND3P21-201ENST00000433774 331 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.06□□□□□ -2.08
PDGFBP01127 NFU1P2-201ENST00000448700 469 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.06□□□□□ -2.08
PDGFBP01127 RNU6-1208P-201ENST00000459588 107 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 AC104564.1-201ENST00000493028 407 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.06□□□□□ -2.08
PDGFBP01127 AC011352.1-201ENST00000512300 793 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 RNU6-667P-201ENST00000517186 102 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.06□□□□□ -2.08
PDGFBP01127 MTCO3P23-201ENST00000561363 289 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 AC005034.5-201ENST00000604219 466 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 AC064836.2-201ENST00000609491 462 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 AC063943.3-201ENST00000615562 356 ntBASIC2.06□□□□□ -2.08
PDGFBP01127 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.06□□□□□ -2.08
PDGFBP01127 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PDGFBP01127 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.06□□□□□ -2.08
PDGFBP01127 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDGFBP01127 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.05□□□□□ -2.08
PDGFBP01127 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PDGFBP01127 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PDGFBP01127 RNU6-105P-201ENST00000363909 104 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 RNU6-611P-201ENST00000384276 104 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 Y_RNA.573-201ENST00000384763 105 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 Y_RNA.599-201ENST00000410489 109 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 RNU2-32P-201ENST00000411193 191 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.05□□□□□ -2.08
PDGFBP01127 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.05□□□□□ -2.08
PDGFBP01127 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.05□□□□□ -2.08
PDGFBP01127 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.05□□□□□ -2.08
PDGFBP01127 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.05□□□□□ -2.08
PDGFBP01127 RNU7-138P-201ENST00000459479 64 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 AC079140.5-201ENST00000507882 310 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 RNA5SP490-201ENST00000517141 136 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.05□□□□□ -2.08
PDGFBP01127 CYCSP27-201ENST00000527643 293 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 AC080078.2-201ENST00000603766 501 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 MIR8081-201ENST00000611533 95 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.05□□□□□ -2.08
PDGFBP01127 AC007014.2-201ENST00000615581 479 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 U4.5-201ENST00000617137 123 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 AC103705.1-201ENST00000619013 241 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 AL162373.1-201ENST00000620433 407 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
PDGFBP01127 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PDGFBP01127 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PDGFBP01127 RNU6-534P-201ENST00000364877 106 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 U8.8-201ENST00000365399 135 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PDGFBP01127 RNU6-1274P-201ENST00000384557 107 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 MIR518A2-201ENST00000384966 87 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 MIR514A2-201ENST00000385131 88 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 MIR514A3-201ENST00000385132 88 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.04□□□□□ -2.08
PDGFBP01127 MTND1P23-201ENST00000416931 372 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.04□□□□□ -2.08
PDGFBP01127 AL590556.1-201ENST00000423231 483 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 AC243964.1-201ENST00000441814 261 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.04□□□□□ -2.08
PDGFBP01127 MTCYBP18-201ENST00000501056 747 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.04□□□□□ -2.08
PDGFBP01127 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.04□□□□□ -2.08
PDGFBP01127 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.04□□□□□ -2.08
PDGFBP01127 Y_RNA.665-201ENST00000516177 98 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 AP005597.4-201ENST00000526762 229 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.04□□□□□ -2.08
PDGFBP01127 AC022616.8-201ENST00000533569 253 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 AC018630.3-201ENST00000542637 96 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PDGFBP01127 MIR4303-201ENST00000581299 66 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.04□□□□□ -2.08
PDGFBP01127 AL109918.3-201ENST00000603072 338 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 AC084782.3-201ENST00000612282 578 ntBASIC2.04□□□□□ -2.08
PDGFBP01127 AC090617.10-201ENST00000624308 134 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms