Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SNORA48.11-201ENST00000517015 89 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 CENPUP1-201ENST00000526649 1202 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 AC016957.1-201ENST00000534895 309 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.55□□□□□ -2.16
CTDNEP1O95476 HMGB1P33-201ENST00000563485 527 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.55□□□□□ -2.16
CTDNEP1O95476 RPL30P11-203ENST00000598995 310 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 AC096772.1-201ENST00000609146 564 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 U2.17-201ENST00000611454 95 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 uc_338.15-201ENST00000615470 191 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 AC073534.2-201ENST00000620377 381 ntBASIC1.55□□□□□ -2.16
CTDNEP1O95476 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.55□□□□□ -2.16
CTDNEP1O95476 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.55□□□□□ -2.16
CTDNEP1O95476 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CTDNEP1O95476 Y_RNA.38-201ENST00000362617 102 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 RNU1-23P-201ENST00000363361 144 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 RNU6-522P-201ENST00000364497 107 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 SNORA25B-201ENST00000365507 128 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 RNU6-827P-201ENST00000365553 106 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 SNORD73A-201ENST00000386062 65 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 RPS29P13-201ENST00000402041 169 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 snoU13.14-201ENST00000459372 104 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 AC018868.1-201ENST00000491307 315 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.54□□□□□ -2.16
CTDNEP1O95476 Y_RNA.655-201ENST00000515919 96 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 AC109329.1-201ENST00000518744 317 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 COPS8P3-201ENST00000526024 482 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.54□□□□□ -2.16
CTDNEP1O95476 AL161670.1-201ENST00000554348 137 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 DNAJC19P9-201ENST00000555084 351 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 AC103996.1-201ENST00000555468 102 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 TPRKBP2-201ENST00000565969 475 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 AC026271.5-201ENST00000577873 130 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 RNU6-85P-201ENST00000605989 107 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 AC092807.2-201ENST00000609367 243 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 AC103705.1-201ENST00000619013 241 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 WWP1P1-201ENST00000466609 2769 ntBASIC1.54□□□□□ -2.16
CTDNEP1O95476 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CTDNEP1O95476 RNU6-527P-201ENST00000363425 104 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 RNA5SP99-201ENST00000364020 114 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 RNU4-66P-201ENST00000365199 138 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 Y_RNA.481-201ENST00000384373 102 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 MIR544A-201ENST00000384855 91 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 MIR518A2-201ENST00000384966 87 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CTDNEP1O95476 RNU6-293P-201ENST00000411259 106 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.53□□□□□ -2.16
CTDNEP1O95476 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.53□□□□□ -2.16
CTDNEP1O95476 TIMM9P3-201ENST00000428659 274 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 RPL39P29-201ENST00000447779 157 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.53□□□□□ -2.16
CTDNEP1O95476 AC006026.2-201ENST00000457376 180 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.53□□□□□ -2.16
CTDNEP1O95476 RNU6-377P-201ENST00000515965 102 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 RNU6-1281P-201ENST00000516223 105 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 RNU6-314P-201ENST00000516574 104 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 RNU6-1069P-201ENST00000516612 133 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 AP005597.4-201ENST00000526762 229 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 GNAI2P1-201ENST00000541815 315 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 PSMA3P-201ENST00000555485 635 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.53□□□□□ -2.16
CTDNEP1O95476 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.53□□□□□ -2.16
CTDNEP1O95476 AC092747.3-201ENST00000603769 301 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 AL121757.2-201ENST00000611223 313 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 AC008121.3-201ENST00000618726 433 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 AL353997.5-201ENST00000618886 171 ntBASIC1.53□□□□□ -2.16
CTDNEP1O95476 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.53□□□□□ -2.16
CTDNEP1O95476 ZNF209P-201ENST00000593450 2304 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 RNU6-212P-201ENST00000362642 104 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 RNU6-451P-201ENST00000362921 107 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 RNU6-1285P-201ENST00000363480 105 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 RNU6-203P-201ENST00000384038 104 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 RNU6-1274P-201ENST00000384557 107 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 SNORD37.1-201ENST00000390968 65 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 VN1R36P-201ENST00000414936 291 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 AC108667.1-201ENST00000428618 249 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 AL591043.1-201ENST00000432461 424 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 AL031274.1-201ENST00000450334 232 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 RPL39P5-202ENST00000512505 151 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 RNU6-189P-201ENST00000516120 101 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 AC034114.1-201ENST00000520293 285 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 MIR3660-201ENST00000584845 100 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 AC010525.2-201ENST00000590920 195 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 BNIP3P25-201ENST00000596023 559 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 AL078605.1-201ENST00000603529 500 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 RNU6-89P-201ENST00000606519 100 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms