Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NPHP4O75161 U4.7-201ENST00000638126 106 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 RNU4-15P-201ENST00000362613 141 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 RNU6-45P-201ENST00000384471 107 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 SNORA48.1-201ENST00000390879 135 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 RNU1-78P-201ENST00000391248 165 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 RNU6-293P-201ENST00000411259 106 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.26□□□□□ -2.21
NPHP4O75161 AL590556.1-201ENST00000423231 483 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC243964.1-201ENST00000441814 261 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.26□□□□□ -2.21
NPHP4O75161 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.26□□□□□ -2.21
NPHP4O75161 AC010409.1-201ENST00000487382 476 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC145146.1-201ENST00000496370 254 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.26□□□□□ -2.21
NPHP4O75161 AC105313.1-201ENST00000509121 353 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC074344.1-201ENST00000512823 224 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.26□□□□□ -2.21
NPHP4O75161 RNU6-1178P-201ENST00000516674 107 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 SNORA31.17-201ENST00000516953 127 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC090572.1-201ENST00000519251 160 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.26□□□□□ -2.21
NPHP4O75161 TRAV32-201ENST00000553993 340 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC090578.1-201ENST00000604955 591 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC130454.1-201ENST00000622948 401 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 AC011155.2-201ENST00000623202 216 ntBASIC1.26□□□□□ -2.21
NPHP4O75161 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
NPHP4O75161 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
NPHP4O75161 RNU6-105P-201ENST00000363909 104 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 RNU6-692P-201ENST00000384496 107 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 RNU6-550P-201ENST00000391057 101 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 RNU6-955P-201ENST00000410497 104 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 GAPDHP17-201ENST00000449858 1001 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 AC130509.1-201ENST00000464158 433 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 AC108078.1-201ENST00000508073 725 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 MTND3P5-201ENST00000512798 333 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 AP001893.2-201ENST00000526949 202 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 AC010900.2-201ENST00000604508 210 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 AC004223.4-201ENST00000612426 332 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 AL050303.3-201ENST00000613704 284 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 Z69720.2-201ENST00000624755 279 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.25□□□□□ -2.21
NPHP4O75161 RNU6-428P-201ENST00000362942 107 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 RNA5SP62-201ENST00000363457 110 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 RNU6-1285P-201ENST00000363480 105 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 Y_RNA.324-201ENST00000365165 102 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 Y_RNA.367-201ENST00000365544 101 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 RNU6-160P-201ENST00000384591 107 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 RNU6-1222P-201ENST00000384615 107 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 AC013410.2-201ENST00000422627 201 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.24□□□□□ -2.21
NPHP4O75161 AC073614.1-201ENST00000438690 650 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 AL035666.1-201ENST00000446195 348 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 AC079448.1-201ENST00000449377 373 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.24□□□□□ -2.21
NPHP4O75161 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.24□□□□□ -2.21
NPHP4O75161 RNU7-125P-201ENST00000458760 62 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 FAM206BP-201ENST00000510179 541 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 SNORA3.4-201ENST00000515969 96 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 Vault.3-201ENST00000516676 95 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.24□□□□□ -2.21
NPHP4O75161 AC110760.3-201ENST00000598794 467 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 AP000654.2-201ENST00000605633 586 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 AC022513.1-201ENST00000624512 117 ntBASIC1.24□□□□□ -2.21
NPHP4O75161 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
NPHP4O75161 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
NPHP4O75161 RNU6-1287P-201ENST00000362914 107 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 RNU6-715P-201ENST00000365204 103 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 RNU6-338P-201ENST00000383888 105 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 RNU6-1060P-201ENST00000384664 107 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 RNU2-8P-201ENST00000410727 190 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.23□□□□□ -2.21
NPHP4O75161 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.23□□□□□ -2.21
NPHP4O75161 SDAD1P3-201ENST00000427380 333 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.23□□□□□ -2.21
NPHP4O75161 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.23□□□□□ -2.21
NPHP4O75161 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.23□□□□□ -2.21
NPHP4O75161 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.23□□□□□ -2.21
NPHP4O75161 AL512605.2-201ENST00000592972 256 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AL590229.1-201ENST00000603497 542 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AC107304.1-201ENST00000604229 296 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AL034555.1-201ENST00000604816 211 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.23□□□□□ -2.21
NPHP4O75161 SNORD98-201ENST00000636377 67 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 U6.114-201ENST00000636407 96 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
NPHP4O75161 MIR330-201ENST00000362196 94 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 Y_RNA.85-201ENST00000363014 111 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 SNORD32B-201ENST00000364460 84 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 MIR1-2-201ENST00000384961 85 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 MIR30A-201ENST00000385092 71 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 RPS3AP3-201ENST00000411933 242 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.23□□□□□ -2.21
NPHP4O75161 AL669831.1-202ENST00000428504 417 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 GTF2IP13-201ENST00000438487 386 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AC027575.1-201ENST00000481064 460 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AC098862.1-201ENST00000504991 413 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.23□□□□□ -2.21
NPHP4O75161 AC005178.1-201ENST00000508392 440 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 RNU6-377P-201ENST00000515965 102 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms