Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
KDM1AO60341 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KDM1AO60341 SNORA71.3-201ENST00000362582 128 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 RNU6-1301P-201ENST00000362724 104 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 SNORD56.3-201ENST00000363507 71 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 SET-203ENST00000372688 801 ntTSL 2 BASIC3.25□□□□□ -1.89
KDM1AO60341 RNU6-26P-201ENST00000383985 107 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 RNU6-574P-201ENST00000384265 107 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 BMS1P22-201ENST00000414726 313 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 Z98742.2-201ENST00000431564 187 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.25□□□□□ -1.89
KDM1AO60341 AC006028.1-201ENST00000438379 402 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 FCF1P4-201ENST00000448326 183 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 RPL7P49-201ENST00000471402 708 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 SCARNA17.1-201ENST00000516211 143 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 SCARNA17.2-201ENST00000516334 143 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 RNU6-58P-201ENST00000517143 103 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 AC245166.1-201ENST00000521012 253 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.25□□□□□ -1.89
KDM1AO60341 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KDM1AO60341 HSPE1P20-201ENST00000538133 289 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 AL121655.1-201ENST00000605811 308 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 SCARNA17.4-201ENST00000614296 143 ntBASIC3.25□□□□□ -1.89
KDM1AO60341 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
KDM1AO60341 RNU6-238P-201ENST00000363313 106 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 Y_RNA.452-201ENST00000384202 108 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 MIR10B-201ENST00000385011 110 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 RNA5SP213-201ENST00000391031 106 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 RNA5SP171-201ENST00000391071 115 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 RNU6-159P-201ENST00000391080 106 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 RPL21P1-201ENST00000399532 476 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 MIR208B-201ENST00000401172 77 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.24□□□□□ -1.89
KDM1AO60341 RPS15AP7-201ENST00000439294 405 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 AC096638.1-201ENST00000444678 216 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.24□□□□□ -1.89
KDM1AO60341 AC010469.2-201ENST00000496412 480 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 SNORA25.11-201ENST00000515935 105 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 RNA5SP112-201ENST00000515937 99 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 RNU2-53P-201ENST00000516257 147 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 SCARNA11.3-201ENST00000517276 130 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.24□□□□□ -1.89
KDM1AO60341 MIR3923-201ENST00000579521 83 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 MIR4503-201ENST00000582187 83 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 MIR4765-201ENST00000585007 77 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 AC005520.5-201ENST00000613926 164 ntBASIC3.24□□□□□ -1.89
KDM1AO60341 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
KDM1AO60341 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KDM1AO60341 SNORA63.1-201ENST00000362493 131 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 RNU6-879P-201ENST00000364328 108 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 SNORD78.2-201ENST00000391076 69 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.23□□□□□ -1.89
KDM1AO60341 AL512633.1-201ENST00000399931 655 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 RN7SKP58-201ENST00000411010 305 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 AC097463.2-201ENST00000421074 142 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.23□□□□□ -1.89
KDM1AO60341 RN7SL807P-201ENST00000470923 297 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 AC067942.3-201ENST00000512025 362 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 RNU6-397P-201ENST00000516226 104 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 SNORA40.15-201ENST00000516884 107 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 RNA5SP54-201ENST00000516951 92 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.23□□□□□ -1.89
KDM1AO60341 UBL5P4-201ENST00000562584 236 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 MIR5695-201ENST00000579717 85 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 MIR3149-201ENST00000584629 83 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 AC125232.2-201ENST00000592457 143 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.23□□□□□ -1.89
KDM1AO60341 uc_338.1-201ENST00000612113 180 ntBASIC3.23□□□□□ -1.89
KDM1AO60341 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KDM1AO60341 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KDM1AO60341 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.22□□□□□ -1.89
KDM1AO60341 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.22□□□□□ -1.89
KDM1AO60341 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.22□□□□□ -1.89
KDM1AO60341 AC099654.7-201ENST00000635788 2127 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 OR56A5-201ENST00000340110 738 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 RNA5SP197-201ENST00000363357 119 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 MIR490-201ENST00000384865 128 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 CBX3P9-201ENST00000402326 552 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.22□□□□□ -1.89
KDM1AO60341 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.22□□□□□ -1.89
KDM1AO60341 CST9LP2-201ENST00000437612 320 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.22□□□□□ -1.89
KDM1AO60341 IPO7P1-201ENST00000442031 636 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 RPL31P41-201ENST00000477967 372 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 RN7SL499P-201ENST00000481141 276 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 RPL23AP70-201ENST00000483361 460 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.22□□□□□ -1.89
KDM1AO60341 AC104027.1-201ENST00000521887 300 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 AL161670.1-201ENST00000554348 137 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.22□□□□□ -1.89
KDM1AO60341 AL162713.1-201ENST00000604480 262 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.22□□□□□ -1.89
KDM1AO60341 AC005296.1-201ENST00000616145 209 ntBASIC3.22□□□□□ -1.89
KDM1AO60341 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.22□□□□□ -1.89
KDM1AO60341 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
KDM1AO60341 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.21□□□□□ -1.9
KDM1AO60341 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
KDM1AO60341 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.9
KDM1AO60341 RNU6-486P-201ENST00000363116 107 ntBASIC3.21□□□□□ -1.9
KDM1AO60341 RNA5SP267-201ENST00000364893 126 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms