Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 CYCSP49-201ENST00000420810 319 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 AL117339.2-201ENST00000430475 180 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 RPL23AP46-201ENST00000438548 490 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXA2O43364 SNRPGP3-201ENST00000469405 227 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.63□□□□□ -1.67
HOXA2O43364 RNU1-61P-201ENST00000516107 151 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 AC093331.1-201ENST00000521474 169 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXA2O43364 AP003357.1-201ENST00000604497 148 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 MIR6867-201ENST00000610636 67 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HOXA2O43364 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA2O43364 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA2O43364 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
HOXA2O43364 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA2O43364 AL159152.1-201ENST00000635019 2587 ntBASIC4.62□□□□□ -1.67
HOXA2O43364 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA2O43364 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA2O43364 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA2O43364 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HOXA2O43364 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXA2O43364 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXA2O43364 AL162151.2-201ENST00000448875 158 ntBASIC4.62□□□□□ -1.67
HOXA2O43364 RPL23AP7-203ENST00000449021 469 ntBASIC4.62□□□□□ -1.67
HOXA2O43364 CENPBD1P1-201ENST00000464061 469 ntBASIC4.62□□□□□ -1.67
HOXA2O43364 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.62□□□□□ -1.67
HOXA2O43364 AC024614.2-201ENST00000577584 372 ntBASIC4.62□□□□□ -1.67
HOXA2O43364 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA2O43364 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA2O43364 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXA2O43364 MAPK10-372ENST00000641954 3413 ntBASIC4.62□□□□□ -1.67
HOXA2O43364 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA2O43364 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA2O43364 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXA2O43364 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HOXA2O43364 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA2O43364 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA2O43364 MIR372-201ENST00000362225 67 ntBASIC4.61□□□□□ -1.67
HOXA2O43364 Y_RNA.124-201ENST00000363339 93 ntBASIC4.61□□□□□ -1.67
HOXA2O43364 RNA5SP283-201ENST00000365604 119 ntBASIC4.61□□□□□ -1.67
HOXA2O43364 RNU6-1080P-201ENST00000383982 107 ntBASIC4.61□□□□□ -1.67
HOXA2O43364 SNORA40.5-201ENST00000391061 128 ntBASIC4.61□□□□□ -1.67
HOXA2O43364 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXA2O43364 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXA2O43364 RNU7-116P-201ENST00000516940 62 ntBASIC4.61□□□□□ -1.67
HOXA2O43364 AC133485.4-201ENST00000561835 220 ntBASIC4.61□□□□□ -1.67
HOXA2O43364 AC138907.4-201ENST00000570107 226 ntBASIC4.61□□□□□ -1.67
HOXA2O43364 AL670379.3-201ENST00000605040 251 ntBASIC4.61□□□□□ -1.67
HOXA2O43364 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA2O43364 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA2O43364 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXA2O43364 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
HOXA2O43364 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA2O43364 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA2O43364 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA2O43364 AC002546.1-201ENST00000588041 2504 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 RNU1-20P-201ENST00000363314 162 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 RNU6-1323P-201ENST00000384025 107 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 RNU1-44P-201ENST00000384453 163 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 MIR23B-201ENST00000384832 97 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 MIR1185-2-201ENST00000408687 86 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 RNU2-49P-201ENST00000410666 184 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 AC063976.4-201ENST00000421971 163 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA2O43364 SNRPGP8-201ENST00000454064 226 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 RNA5SP246-201ENST00000458909 119 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 RNU6-1337P-201ENST00000516525 95 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HOXA2O43364 AC034105.4-201ENST00000568304 277 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 AC108081.1-201ENST00000604358 221 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 RNU1-30P-201ENST00000606575 163 ntBASIC4.6□□□□□ -1.67
HOXA2O43364 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HOXA2O43364 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA2O43364 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA2O43364 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA2O43364 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HOXA2O43364 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HOXA2O43364 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA2O43364 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA2O43364 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXA2O43364 Y_RNA.120-201ENST00000363304 110 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 RNA5SP130-201ENST00000364431 114 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 SNORD6-201ENST00000365444 73 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 RNU1-57P-201ENST00000384491 166 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 RNA5SP496-201ENST00000391240 109 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXA2O43364 RPL21P65-201ENST00000406094 466 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 RN7SKP202-201ENST00000410439 330 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 RPL36AP10-201ENST00000421785 322 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXA2O43364 SNORA71B-202ENST00000439232 272 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 AL158147.1-201ENST00000443970 75 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 AL358232.1-201ENST00000448030 501 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 RNU6-437P-201ENST00000459408 95 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 RN7SL817P-201ENST00000480777 288 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 RN7SL604P-201ENST00000492589 296 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 RN7SKP46-201ENST00000515942 234 ntBASIC4.59□□□□□ -1.67
HOXA2O43364 SNORD33.1-201ENST00000516213 88 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms