Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM38O00635 MTND5P6-201ENST00000422338 1798 ntBASIC3.1□□□□□ -1.91
TRIM38O00635 Y_RNA.150-201ENST00000363562 102 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 Y_RNA.180-201ENST00000363867 113 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 RNU4-42P-201ENST00000364738 142 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 SNORD21-201ENST00000383953 95 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 Y_RNA.462-201ENST00000384268 102 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 Y_RNA.785-201ENST00000384290 109 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 AL513475.1-201ENST00000406602 315 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 RNU2-14P-201ENST00000411053 191 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 BMS1P22-201ENST00000414726 313 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM38O00635 AC004383.1-201ENST00000438135 289 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM38O00635 PRELID3BP1-201ENST00000457142 540 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 RPL23AP49-201ENST00000492925 468 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 SNORA40.14-201ENST00000516543 86 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 RNU6-307P-201ENST00000516743 106 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM38O00635 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM38O00635 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM38O00635 AC109446.1-201ENST00000566172 220 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 AC090517.1-201ENST00000569307 266 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 MIR3910-1-201ENST00000580936 111 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 FTX_2.1-201ENST00000618816 94 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 MAPK10-266ENST00000641066 6555 ntBASIC3.09□□□□□ -1.91
TRIM38O00635 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRIM38O00635 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.09□□□□□ -1.92
TRIM38O00635 AL109809.4-201ENST00000603520 2185 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM38O00635 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM38O00635 OR56A5-201ENST00000340110 738 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 Y_RNA.151-201ENST00000363566 112 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 SNORA5B-201ENST00000363786 132 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 RNU6-1329P-201ENST00000365664 107 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 RNU6-187P-201ENST00000384139 106 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 SNORA54-201ENST00000384281 123 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 Y_RNA.539-201ENST00000384635 107 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TRIM38O00635 RPS29P13-201ENST00000402041 169 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 AP000275.1-201ENST00000411943 390 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 MTCO3P19-201ENST00000415864 321 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 AC074117.2-201ENST00000417130 397 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM38O00635 BX276092.3-201ENST00000424182 230 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 AL353997.1-201ENST00000432936 108 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 AC124916.1-201ENST00000444020 547 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 AL031274.1-201ENST00000450334 232 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM38O00635 SCARNA17.1-201ENST00000516211 143 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 RNU6-397P-201ENST00000516226 104 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 SCARNA17.2-201ENST00000516334 143 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 RNU6-570P-201ENST00000517051 105 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 CKS1BP7-201ENST00000522230 235 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.08□□□□□ -1.92
TRIM38O00635 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM38O00635 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.08□□□□□ -1.92
TRIM38O00635 AC010900.2-201ENST00000604508 210 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 SCARNA17.4-201ENST00000614296 143 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM38O00635 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM38O00635 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM38O00635 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
TRIM38O00635 AL359854.1-201ENST00000614203 1594 ntBASIC3.08□□□□□ -1.92
TRIM38O00635 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM38O00635 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM38O00635 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM38O00635 Y_RNA.19-201ENST00000362462 99 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 Y_RNA.105-201ENST00000363182 111 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 RNU6-622P-201ENST00000384272 103 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 MIR517A-201ENST00000385001 87 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 RNA5SP390-201ENST00000410191 113 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM38O00635 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM38O00635 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM38O00635 MICF-203ENST00000432679 129 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 FCF1P4-201ENST00000448326 183 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM38O00635 AP001324.2-201ENST00000461163 319 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 AC018437.1-201ENST00000492214 406 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM38O00635 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM38O00635 SNORA31.6-201ENST00000516241 130 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 RNU6-182P-201ENST00000516970 105 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 SNORA31.23-201ENST00000517219 133 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 SNORA81.3-201ENST00000517283 198 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM38O00635 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM38O00635 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM38O00635 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM38O00635 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM38O00635 AC009779.6-201ENST00000603972 165 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 ELOCP5-201ENST00000604924 333 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 AL121917.1-203ENST00000605534 577 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 RBBP8P1-201ENST00000449447 1844 ntBASIC3.07□□□□□ -1.92
TRIM38O00635 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM38O00635 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms