Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MTND1P18-201ENST00000448191 573 ntBASIC1.13□□□□□ -2.23
DFFAO00273 ATP5J2P3-201ENST00000451550 258 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AC016925.1-201ENST00000458303 298 ntBASIC1.13□□□□□ -2.23
DFFAO00273 RNU7-182P-201ENST00000459009 62 ntBASIC1.13□□□□□ -2.23
DFFAO00273 RNA5SP269-201ENST00000459032 137 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AC108078.1-201ENST00000508073 725 ntBASIC1.13□□□□□ -2.23
DFFAO00273 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.13□□□□□ -2.23
DFFAO00273 RNA5SP503-201ENST00000517047 117 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.13□□□□□ -2.23
DFFAO00273 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.13□□□□□ -2.23
DFFAO00273 AC012414.6-201ENST00000568241 401 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AC005668.1-201ENST00000571142 476 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.13□□□□□ -2.23
DFFAO00273 AC078795.3-201ENST00000602913 472 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AC091805.2-201ENST00000603848 235 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AC008945.2-201ENST00000606056 604 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AC022960.3-201ENST00000619794 441 ntBASIC1.13□□□□□ -2.23
DFFAO00273 AC022418.1-201ENST00000624118 445 ntBASIC1.13□□□□□ -2.23
DFFAO00273 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
DFFAO00273 Y_RNA.255-201ENST00000364581 97 ntBASIC1.12□□□□□ -2.23
DFFAO00273 SNORD31B-201ENST00000364977 69 ntBASIC1.12□□□□□ -2.23
DFFAO00273 RNU6-108P-201ENST00000365558 107 ntBASIC1.12□□□□□ -2.23
DFFAO00273 RNU6-1029P-201ENST00000384109 107 ntBASIC1.12□□□□□ -2.23
DFFAO00273 Y_RNA.480-201ENST00000384364 102 ntBASIC1.12□□□□□ -2.23
DFFAO00273 RNU6-195P-201ENST00000411352 109 ntBASIC1.12□□□□□ -2.23
DFFAO00273 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.12□□□□□ -2.23
DFFAO00273 HIGD1AP15-201ENST00000416198 280 ntBASIC1.12□□□□□ -2.23
DFFAO00273 AL133396.1-201ENST00000432048 687 ntBASIC1.12□□□□□ -2.23
DFFAO00273 AC009961.2-201ENST00000435771 251 ntBASIC1.12□□□□□ -2.23
DFFAO00273 AC027119.1-201ENST00000440877 241 ntBASIC1.12□□□□□ -2.23
DFFAO00273 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.12□□□□□ -2.23
DFFAO00273 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.12□□□□□ -2.23
DFFAO00273 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.12□□□□□ -2.23
DFFAO00273 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.12□□□□□ -2.23
DFFAO00273 AC007547.1-201ENST00000462177 490 ntBASIC1.12□□□□□ -2.23
DFFAO00273 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.12□□□□□ -2.23
DFFAO00273 AC005840.1-201ENST00000498412 377 ntBASIC1.12□□□□□ -2.23
DFFAO00273 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.12□□□□□ -2.23
DFFAO00273 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.12□□□□□ -2.23
DFFAO00273 TRMT112P2-201ENST00000512910 132 ntBASIC1.12□□□□□ -2.23
DFFAO00273 RNU6-1098P-201ENST00000516772 96 ntBASIC1.12□□□□□ -2.23
DFFAO00273 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.12□□□□□ -2.23
DFFAO00273 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
DFFAO00273 BNIP3P39-201ENST00000601077 554 ntBASIC1.12□□□□□ -2.23
DFFAO00273 AC080078.3-201ENST00000605407 463 ntBASIC1.12□□□□□ -2.23
DFFAO00273 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.12□□□□□ -2.23
DFFAO00273 AC083806.3-201ENST00000614016 455 ntBASIC1.12□□□□□ -2.23
DFFAO00273 AC008250.2-201ENST00000615261 205 ntBASIC1.12□□□□□ -2.23
DFFAO00273 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
DFFAO00273 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.12□□□□□ -2.23
DFFAO00273 AC136475.10-201ENST00000620253 385 ntBASIC1.12□□□□□ -2.23
DFFAO00273 SEPT14P19-203ENST00000633205 211 ntBASIC1.12□□□□□ -2.23
DFFAO00273 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.12□□□□□ -2.23
DFFAO00273 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
DFFAO00273 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.12□□□□□ -2.23
DFFAO00273 AL159152.1-201ENST00000635019 2587 ntBASIC1.11□□□□□ -2.23
DFFAO00273 AC010615.1-201ENST00000594254 1764 ntBASIC1.11□□□□□ -2.23
DFFAO00273 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.11□□□□□ -2.23
DFFAO00273 MIR548B-201ENST00000385247 97 ntBASIC1.11□□□□□ -2.23
DFFAO00273 RNU2-7P-201ENST00000410794 178 ntBASIC1.11□□□□□ -2.23
DFFAO00273 MTND3P17-201ENST00000416968 344 ntBASIC1.11□□□□□ -2.23
DFFAO00273 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.11□□□□□ -2.23
DFFAO00273 ISCA1P6-201ENST00000427740 390 ntBASIC1.11□□□□□ -2.23
DFFAO00273 AL135790.2-201ENST00000437701 267 ntBASIC1.11□□□□□ -2.23
DFFAO00273 snoU13.30-201ENST00000458951 104 ntBASIC1.11□□□□□ -2.23
DFFAO00273 RNU7-14P-201ENST00000459331 62 ntBASIC1.11□□□□□ -2.23
DFFAO00273 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.11□□□□□ -2.23
DFFAO00273 AC079382.1-201ENST00000493346 557 ntBASIC1.11□□□□□ -2.23
DFFAO00273 AC016632.1-201ENST00000503994 196 ntBASIC1.11□□□□□ -2.23
DFFAO00273 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
DFFAO00273 RNU6-1129P-201ENST00000515964 104 ntBASIC1.11□□□□□ -2.23
DFFAO00273 RNU5F-4P-201ENST00000516581 114 ntBASIC1.11□□□□□ -2.23
DFFAO00273 RRN3P3-201ENST00000549207 578 ntBASIC1.11□□□□□ -2.23
DFFAO00273 EIF4A1P12-201ENST00000551910 141 ntBASIC1.11□□□□□ -2.23
DFFAO00273 AC016727.1-205ENST00000605437 569 ntBASIC1.11□□□□□ -2.23
DFFAO00273 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.11□□□□□ -2.23
DFFAO00273 AL603839.4-201ENST00000624658 1005 ntBASIC1.11□□□□□ -2.23
DFFAO00273 AC095038.3-201ENST00000634439 195 ntBASIC1.11□□□□□ -2.23
DFFAO00273 AL450472.1-202ENST00000637286 180 ntBASIC1.11□□□□□ -2.23
DFFAO00273 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.11□□□□□ -2.23
DFFAO00273 RNU6-862P-201ENST00000362804 105 ntBASIC1.1□□□□□ -2.23
DFFAO00273 RNU6-552P-201ENST00000362869 119 ntBASIC1.1□□□□□ -2.23
DFFAO00273 RNU1-76P-201ENST00000362903 159 ntBASIC1.1□□□□□ -2.23
DFFAO00273 RNU6-1097P-201ENST00000363586 107 ntBASIC1.1□□□□□ -2.23
DFFAO00273 RNU6-378P-201ENST00000384324 107 ntBASIC1.1□□□□□ -2.23
DFFAO00273 RNU6-393P-201ENST00000384475 107 ntBASIC1.1□□□□□ -2.23
DFFAO00273 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
DFFAO00273 MIR1-2-201ENST00000384961 85 ntBASIC1.1□□□□□ -2.23
DFFAO00273 MTCO1P21-201ENST00000416634 589 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AC002486.1-201ENST00000435098 391 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AC244505.5-201ENST00000443639 207 ntBASIC1.1□□□□□ -2.23
DFFAO00273 PRPS1P1-201ENST00000445305 876 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AL031274.1-201ENST00000450334 232 ntBASIC1.1□□□□□ -2.23
DFFAO00273 OR2AQ1P-201ENST00000451972 200 ntBASIC1.1□□□□□ -2.23
DFFAO00273 RPS29P15-201ENST00000458329 171 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AC010531.2-201ENST00000465012 153 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.1□□□□□ -2.23
DFFAO00273 AC079140.2-201ENST00000506193 142 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AC079140.3-201ENST00000511111 550 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms