Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 RNU6-393P-201ENST00000384475 107 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 MTCO3P41-201ENST00000414801 328 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 AC010975.2-201ENST00000427781 588 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 AL669831.1-202ENST00000428504 417 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 GTF2IP13-201ENST00000438487 386 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 MTCO1P44-201ENST00000441935 243 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 MTND1P18-201ENST00000448191 573 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.58□□□□□ -2.16
CLRN2A0PK11 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.58□□□□□ -2.16
CLRN2A0PK11 AC023050.3-201ENST00000541142 333 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 MIR5094-201ENST00000578766 85 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 AC091805.2-201ENST00000603848 235 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 AC091304.6-201ENST00000619761 202 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 AC091931.1-201ENST00000623488 728 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
CLRN2A0PK11 Y_RNA.201-201ENST00000364052 96 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 RNU6-336P-201ENST00000364891 107 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 RNU6-108P-201ENST00000365558 107 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 RNU6-438P-201ENST00000365561 103 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 RNY3P10-201ENST00000384764 102 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 SNORD70.1-201ENST00000391007 85 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 SNORA40.6-201ENST00000391153 128 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 MIR1267-201ENST00000408723 78 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 RNU4-46P-201ENST00000410818 138 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 RPL21P111-201ENST00000418453 477 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 AC244670.1-201ENST00000436879 112 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.57□□□□□ -2.16
CLRN2A0PK11 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.57□□□□□ -2.16
CLRN2A0PK11 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.57□□□□□ -2.16
CLRN2A0PK11 Y_RNA.670-201ENST00000516255 105 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.57□□□□□ -2.16
CLRN2A0PK11 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.57□□□□□ -2.16
CLRN2A0PK11 HSPE1P4-201ENST00000550617 308 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.57□□□□□ -2.16
CLRN2A0PK11 AL160236.1-201ENST00000556317 195 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.57□□□□□ -2.16
CLRN2A0PK11 MIR3660-201ENST00000584845 100 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 BNIP3P16-201ENST00000589779 534 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 AC245014.2-201ENST00000603689 287 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 AC064872.1-201ENST00000604823 1072 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 AC246785.4-201ENST00000605374 287 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 AC006566.1-201ENST00000608943 513 ntBASIC1.57□□□□□ -2.16
CLRN2A0PK11 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CLRN2A0PK11 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CLRN2A0PK11 RNU6-112P-201ENST00000363599 104 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 RNU1-78P-201ENST00000391248 165 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 MTND3P17-201ENST00000416968 344 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 AL365203.2-201ENST00000423444 196 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CLRN2A0PK11 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.56□□□□□ -2.16
CLRN2A0PK11 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 COX6CP14-201ENST00000469580 174 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 AK3P2-201ENST00000507976 429 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 AC097473.1-201ENST00000508142 408 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 MTND1P22-201ENST00000510572 951 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 SNORA31.16-201ENST00000516773 139 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 SUMO2P18-201ENST00000518873 252 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 AC060788.1-201ENST00000521318 469 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.56□□□□□ -2.16
CLRN2A0PK11 AL360219.1-201ENST00000610230 366 ntBASIC1.56□□□□□ -2.16
CLRN2A0PK11 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CLRN2A0PK11 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CLRN2A0PK11 RNU6-434P-201ENST00000384376 107 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 RNU6-297P-201ENST00000384636 107 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 RNU2-9P-201ENST00000410194 145 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.55□□□□□ -2.16
CLRN2A0PK11 MTCO3P46-201ENST00000425787 232 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 SNRPEP8-201ENST00000442866 260 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 RPS4XP11-201ENST00000446897 772 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.55□□□□□ -2.16
CLRN2A0PK11 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.55□□□□□ -2.16
CLRN2A0PK11 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.55□□□□□ -2.16
CLRN2A0PK11 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 AC092436.3-201ENST00000511788 257 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 RNA5SP480-201ENST00000516840 109 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.55□□□□□ -2.16
CLRN2A0PK11 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.55□□□□□ -2.16
CLRN2A0PK11 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.55□□□□□ -2.16
CLRN2A0PK11 AC087683.2-201ENST00000611384 326 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 AC022418.1-201ENST00000624118 445 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 AC022513.1-201ENST00000624512 117 ntBASIC1.55□□□□□ -2.16
CLRN2A0PK11 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLRN2A0PK11 RNU6-282P-201ENST00000365357 103 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 RNU4-48P-201ENST00000365559 182 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 SNORA26.8-201ENST00000391306 124 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
CLRN2A0PK11 MTCYBP2-201ENST00000407745 171 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
CLRN2A0PK11 AC139712.2-201ENST00000424302 339 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.54□□□□□ -2.16
CLRN2A0PK11 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.54□□□□□ -2.16
CLRN2A0PK11 LRRC34P2-201ENST00000514850 553 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 SNORD27.1-201ENST00000516319 72 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 RNA5SP61-201ENST00000516453 100 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.54□□□□□ -2.16
CLRN2A0PK11 AC103996.1-201ENST00000555468 102 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.54□□□□□ -2.16
CLRN2A0PK11 HMGB1P33-201ENST00000563485 527 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.54□□□□□ -2.16
CLRN2A0PK11 MIR3923-201ENST00000579521 83 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 488.3 ms