Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 RNU4-56P-201ENST00000364700 142 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SNORA29-201ENST00000384183 140 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC009963.1-201ENST00000417265 157 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 USP9YP30-201ENST00000430729 455 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MTND4P18-201ENST00000447010 465 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC018868.1-201ENST00000491307 315 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC091951.2-201ENST00000500762 203 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC021146.2-201ENST00000504736 556 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC026782.1-201ENST00000512952 449 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 ACA59.1-201ENST00000515966 143 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-1016P-201ENST00000516689 94 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MRPS36P4-201ENST00000534436 298 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 CYP4A27P-201ENST00000567218 190 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR3923-201ENST00000579521 83 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC018462.2-201ENST00000605375 395 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC009318.2-201ENST00000610917 651 ntBASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.05□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SNORD32B-201ENST00000364460 84 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 Y_RNA.333-201ENST00000365274 102 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SNORA70.4-201ENST00000365509 134 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR561-201ENST00000385216 97 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SNORA46.1-201ENST00000391069 153 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RPL37P10-201ENST00000412884 288 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC012306.1-201ENST00000423267 114 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 Z82205.1-201ENST00000428456 297 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MTND5P20-201ENST00000448677 143 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AL513124.1-201ENST00000450410 614 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC145146.1-201ENST00000496370 254 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RN7SL636P-201ENST00000497504 294 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MTND4P12-201ENST00000498999 1377 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC005741.1-201ENST00000511094 432 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNA5SP24-201ENST00000516478 95 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR5696-201ENST00000578474 85 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 LARP7P3-201ENST00000579888 337 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC005000.2-201ENST00000605468 310 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 PCGEM1.1-201ENST00000613431 131 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR6895-201ENST00000613497 78 ntBASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRBV4-1A0A0J9YWV2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 Y_RNA.142-201ENST00000363491 102 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-968P-201ENST00000384076 107 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU1-52P-201ENST00000384190 164 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-842P-201ENST00000384269 107 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 Y_RNA.474-201ENST00000384341 102 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 Y_RNA.482-201ENST00000384377 111 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 Y_RNA.597-201ENST00000410463 100 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU2-48P-201ENST00000410694 191 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RPS26P42-201ENST00000413485 326 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 CBX3P6-201ENST00000430257 527 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AF186996.7-201ENST00000492781 209 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 RNU6-875P-201ENST00000516488 106 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC105029.1-201ENST00000520250 669 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 MIR5694-201ENST00000581190 76 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC011494.1-201ENST00000596454 237 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC098657.3-201ENST00000620434 263 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 AC009831.4-201ENST00000620744 325 ntBASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.03□□□□□ -2.08
TRBV4-1A0A0J9YWV2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.03□□□□□ -2.09
TRBV4-1A0A0J9YWV2 MTND5P9-201ENST00000503854 1755 ntBASIC2.03□□□□□ -2.09
TRBV4-1A0A0J9YWV2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
TRBV4-1A0A0J9YWV2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRBV4-1A0A0J9YWV2 RNU6-1059P-201ENST00000363752 98 ntBASIC2.02□□□□□ -2.09
TRBV4-1A0A0J9YWV2 SNORA25B-201ENST00000365507 128 ntBASIC2.02□□□□□ -2.09
TRBV4-1A0A0J9YWV2 RNU1-148P-201ENST00000384472 162 ntBASIC2.02□□□□□ -2.09
TRBV4-1A0A0J9YWV2 MTND4LP11-201ENST00000422184 280 ntBASIC2.02□□□□□ -2.09
TRBV4-1A0A0J9YWV2 AL358453.1-201ENST00000422522 250 ntBASIC2.02□□□□□ -2.09
TRBV4-1A0A0J9YWV2 AL590556.1-201ENST00000423231 483 ntBASIC2.02□□□□□ -2.09
TRBV4-1A0A0J9YWV2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.02□□□□□ -2.09
TRBV4-1A0A0J9YWV2 MTND4P17-201ENST00000470444 350 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms