Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL117342.1-201ENST00000404861 406 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-1245P-201ENST00000411130 106 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 DYNLT3P2-201ENST00000442517 295 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AL133217.1-201ENST00000450980 425 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AC013470.1-201ENST00000453438 462 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AC016925.1-201ENST00000458303 298 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AC007547.1-201ENST00000462177 490 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 MTND3P3-201ENST00000505004 126 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AC091874.1-201ENST00000511402 339 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-311P-201ENST00000516224 102 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 MRPS36P3-201ENST00000519284 130 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 CYP3A52P-201ENST00000563326 91 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 BNIP3P16-201ENST00000589779 534 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AC107304.1-201ENST00000604229 296 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 CTHRC1P1-201ENST00000605383 469 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 MIR3976-201ENST00000606807 139 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 PCGEM1.1-201ENST00000613431 131 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AC012676.2-201ENST00000619258 186 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AC022306.3-201ENST00000619930 550 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AC138649.3-201ENST00000622154 254 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 AL133216.2-202ENST00000634512 349 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 AL159152.1-201ENST00000635019 2587 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 AL391516.1-201ENST00000554380 2449 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 MTND5P35-201ENST00000557537 1720 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 Y_RNA.4-201ENST00000362333 112 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 U3.4-201ENST00000363352 213 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 Y_RNA.164-201ENST00000363709 102 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 RNU1-124P-201ENST00000363861 145 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-1187P-201ENST00000364771 110 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-438P-201ENST00000365561 103 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-378P-201ENST00000384324 107 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 MIR194-1-201ENST00000384892 85 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 RN7SKP61-201ENST00000410642 295 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 ISCA1P6-201ENST00000427740 390 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 SNAP23P1-201ENST00000433229 246 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 PGBD4P5-201ENST00000445958 426 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 ATP5J2P3-201ENST00000451550 258 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 AC104136.1-201ENST00000512969 394 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-1178P-201ENST00000516674 107 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 HSPE1P4-201ENST00000550617 308 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 NIFKP6-201ENST00000598115 845 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 MIR7844-201ENST00000616161 122 ntBASIC0.76□□□□□ -2.29
TRAV41A0A0B4J266 SNORD114-27-201ENST00000363766 70 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 SNORD31B-201ENST00000364977 69 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-1080P-201ENST00000383982 107 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 SNORA36A-201ENST00000384221 132 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-331P-201ENST00000384724 107 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 RPS29P13-201ENST00000402041 169 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 HIGD1AP15-201ENST00000416198 280 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 AL117339.3-201ENST00000418733 162 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 RPL23AP95-201ENST00000426806 265 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 RNU7-14P-201ENST00000459331 62 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 MTATP6P9-201ENST00000515039 680 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 SNORD116-28-201ENST00000516123 91 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 RNA5SP102-201ENST00000516865 106 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 ELOCP32-201ENST00000548625 324 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 MIR8065-201ENST00000620577 100 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 AC009033.1-201ENST00000624279 431 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 AC099654.5-201ENST00000636479 350 ntBASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV41A0A0B4J266 RNU1-76P-201ENST00000362903 159 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 U3.9-201ENST00000363823 204 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-1019P-201ENST00000364424 107 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 SNORA4.2-201ENST00000365313 147 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-968P-201ENST00000384076 107 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 RNU2-8P-201ENST00000410727 190 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 RNU2-7P-201ENST00000410794 178 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 AL593851.1-201ENST00000426171 157 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 RPS27P1-201ENST00000450552 247 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 RPL39P28-201ENST00000465655 155 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 UBL5P1-201ENST00000507979 193 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-1041P-201ENST00000516254 102 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 RNA5SP481-201ENST00000516814 122 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 SNORD60.2-201ENST00000516883 86 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 CENPUP1-201ENST00000526649 1202 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 MIR3923-201ENST00000579521 83 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 MIR548AB-201ENST00000584917 84 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 AL022161.1-201ENST00000604390 213 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 Z98751.3-201ENST00000604447 521 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms