Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 MIR22-201ENST00000362190 85 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 U3.6-201ENST00000363622 211 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 RNU6-770P-201ENST00000363929 105 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 RNU6-200P-201ENST00000364743 107 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 DYNLT3P1-201ENST00000378574 347 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.785-201ENST00000384290 109 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.551-201ENST00000384661 102 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 RNU6-713P-201ENST00000384761 107 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 RNU6-1093P-201ENST00000391194 107 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 BTF3L4P2-201ENST00000392798 346 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 EIF4EP2-201ENST00000422816 654 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 MTND4LP30-201ENST00000454092 297 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 RPL17P19-201ENST00000489069 552 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 RNA5SP356-201ENST00000515972 94 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 CKS1BP7-201ENST00000522230 235 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 FAM35CP-201ENST00000554755 2470 ntBASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 RBBP8P1-201ENST00000449447 1844 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 ZNF72P-201ENST00000425869 1908 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.105-201ENST00000363182 111 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.314-201ENST00000365114 102 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.477-201ENST00000384352 108 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 MIR147B-201ENST00000390185 80 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 MIR1302-6-201ENST00000408466 90 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 RNA5SP390-201ENST00000410191 113 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 RNU2-14P-201ENST00000411053 191 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 RPL23AP50-201ENST00000434149 455 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AL392103.1-201ENST00000447000 198 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 RPL39P38-201ENST00000467018 153 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AP001025.1-201ENST00000486139 332 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AC091826.1-201ENST00000514065 313 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 RNU5B-3P-201ENST00000516601 115 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 RNU6-111P-201ENST00000517179 105 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AC109329.1-201ENST00000518744 317 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 GTF3AP2-201ENST00000557014 266 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AC090517.1-201ENST00000569307 266 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 ELOCP29-201ENST00000588193 334 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AL356157.2-201ENST00000605122 111 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 RNU6-91P-201ENST00000607774 107 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 AL138825.1-201ENST00000618587 192 ntBASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC187A0A096LP49 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 OR56A5-201ENST00000340110 738 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.20-201ENST00000362479 113 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.180-201ENST00000363867 113 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RNY3P11-201ENST00000364153 102 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 SNORA20.1-201ENST00000364790 130 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 SNORD21-201ENST00000383953 95 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RNU6-622P-201ENST00000384272 103 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 MIR548M-201ENST00000408260 86 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RNU6-1156P-201ENST00000410365 100 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 AL139132.1-201ENST00000431587 344 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RPL31P41-201ENST00000477967 372 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RN7SL429P-201ENST00000479090 223 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 AC021205.2-201ENST00000480069 347 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RN7SL489P-201ENST00000486185 223 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RN7SL327P-201ENST00000488659 223 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 AC083906.5-201ENST00000503722 328 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.673-201ENST00000516306 88 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RNA5SP367-201ENST00000516557 118 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 HSPE1P20-201ENST00000538133 289 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 MIR3162-201ENST00000581818 82 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 AC004832.5-201ENST00000608677 401 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 RN7SL853P-201ENST00000617250 223 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 SDR42E1P4-201ENST00000620894 481 ntBASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC187A0A096LP49 MTND5P9-201ENST00000503854 1755 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 RNU6-301P-201ENST00000384277 107 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.515-201ENST00000384535 112 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.539-201ENST00000384635 107 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms