Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HS3ST3A1Q9Y663 AL109809.4-201ENST00000603520 2185 ntBASIC3.29□□□□□ -1.88
HS3ST3A1Q9Y663 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HS3ST3A1Q9Y663 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.29□□□□□ -1.88
HS3ST3A1Q9Y663 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HS3ST3A1Q9Y663 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AL513302.2-201ENST00000562313 1842 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RNU6-1167P-201ENST00000363227 94 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RNU6-626P-201ENST00000363354 107 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 Y_RNA.127-201ENST00000363386 109 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RNU6-961P-201ENST00000363893 105 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RNU6-336P-201ENST00000364891 107 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RNU4-9P-201ENST00000364951 139 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RNU6-741P-201ENST00000383889 107 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 Y_RNA.571-201ENST00000384753 98 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 ARF4P2-201ENST00000430209 526 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RPS15AP7-201ENST00000439294 405 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AC009296.1-201ENST00000443146 155 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 FABP5P15-201ENST00000453566 214 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RPL30P1-201ENST00000488676 339 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RN7SL504P-201ENST00000494496 287 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RNU6-567P-201ENST00000516746 107 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 RNU6-840P-201ENST00000517275 65 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AC233702.2-202ENST00000562547 291 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 MIR5047-201ENST00000579212 100 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AC008121.1-201ENST00000603244 268 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AL162713.1-201ENST00000604480 262 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AC037487.3-201ENST00000606668 112 ntBASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HS3ST3A1Q9Y663 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
HS3ST3A1Q9Y663 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 AC233981.2-201ENST00000611524 1614 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 Y_RNA.71-201ENST00000362892 104 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 RNU6-173P-201ENST00000364215 104 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 RNU6-312P-201ENST00000364629 107 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 Y_RNA.262-201ENST00000364641 102 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 RNU6-1325P-201ENST00000364905 105 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 NDUFB4P4-201ENST00000404822 243 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 AL357139.1-201ENST00000407792 426 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 RAB28P5-201ENST00000427490 651 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 AC079780.1-201ENST00000428259 207 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 RPL23AP3-201ENST00000453844 468 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 AP000870.1-201ENST00000472927 406 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 HMGB3P3-201ENST00000510526 400 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 RNU6-966P-201ENST00000516479 104 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 RNU7-110P-201ENST00000516891 62 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 MIR4738-201ENST00000579134 87 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 MIR3690-201ENST00000580266 75 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 AL133393.1-201ENST00000603277 287 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 U4.7-201ENST00000638126 106 ntBASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HS3ST3A1Q9Y663 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 SNORD115-32-201ENST00000364079 82 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 Y_RNA.412-201ENST00000384001 104 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 RNU6-20P-201ENST00000384106 107 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 AC126124.2-201ENST00000413542 321 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 AL627311.1-201ENST00000431514 115 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 AC096638.1-201ENST00000444678 216 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 RN7SL330P-201ENST00000469709 307 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 AC097462.2-201ENST00000504623 481 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 GMPSP1-201ENST00000514075 579 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 SNORA40.9-201ENST00000515895 93 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 RNU7-121P-201ENST00000516604 62 ntBASIC3.26□□□□□ -1.89
HS3ST3A1Q9Y663 RN7SKP49-201ENST00000516675 260 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms