Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 Y_RNA.682-201ENST00000516457 100 ntBASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 RNU6-667P-201ENST00000517186 102 ntBASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 AL078605.1-201ENST00000603529 500 ntBASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 AL359697.1-201ENST00000624879 587 ntBASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 AL137790.1-201ENST00000634283 177 ntBASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PCDHGB3Q9Y5G1 RNU5B-2P-201ENST00000363036 113 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 RNU6-26P-201ENST00000383985 107 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 MIR208B-201ENST00000401172 77 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AL357139.1-201ENST00000407792 426 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 RNA5SP494-201ENST00000410653 129 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 RNA5SP270-201ENST00000411361 118 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AC098614.3-201ENST00000438957 440 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AL137159.1-201ENST00000452808 512 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 RPS27P27-201ENST00000498779 255 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AC021146.2-201ENST00000504736 556 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AC116337.1-201ENST00000509680 687 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 ELOCP31-201ENST00000540463 467 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 MYL12BP1-201ENST00000569826 507 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AL356575.1-201ENST00000603008 283 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AC009994.1-201ENST00000606889 253 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 AC063943.3-201ENST00000615562 356 ntBASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PCDHGB3Q9Y5G1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 SNORA25.6-201ENST00000364121 118 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 SNORA29-201ENST00000384183 140 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 MIR592-201ENST00000384959 97 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 SNORA11.2-201ENST00000408318 127 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 RNU2-48P-201ENST00000410694 191 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 Z82205.1-201ENST00000428456 297 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 AL353705.4-201ENST00000449661 238 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 PMCHL2-203ENST00000457791 237 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 MTND5P5-201ENST00000503764 376 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 AC026470.2-201ENST00000561492 181 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 7SK.7-201ENST00000603504 247 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 AC022306.2-201ENST00000617563 647 ntBASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGB3Q9Y5G1 AC092593.1-201ENST00000515413 1815 ntBASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 RNU6-1283P-201ENST00000365314 105 ntBASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 AL135938.1-201ENST00000443141 297 ntBASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 RNU7-30P-201ENST00000516835 62 ntBASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 SNORA20.3-201ENST00000516880 132 ntBASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 RNU6-1198P-201ENST00000516904 67 ntBASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 MIR3162-201ENST00000581818 82 ntBASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 ZNF861P-201ENST00000588126 639 ntBASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 SNORD14A-201ENST00000606526 91 ntBASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 MIR6128-201ENST00000615528 109 ntBASIC2.63□□□□□ -1.99
PCDHGB3Q9Y5G1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 SNORA5B-201ENST00000363786 132 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 SNORA36A-201ENST00000384221 132 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 Y_RNA.490-201ENST00000384413 102 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 MIR548K-201ENST00000408406 116 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 MIR320B2-201ENST00000408479 138 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 AC138393.2-201ENST00000414742 246 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 CR769767.1-201ENST00000436337 346 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 AC105272.1-201ENST00000438604 198 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 RPS29P26-201ENST00000477483 171 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 AC116353.2-201ENST00000505332 712 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 RNU6-1016P-201ENST00000516689 94 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 HSPE1P18-201ENST00000517602 280 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 AC121758.2-201ENST00000553271 193 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 AL033523.1-201ENST00000605153 153 ntBASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHGB3Q9Y5G1 MTND5P9-201ENST00000503854 1755 ntBASIC2.61□□□□□ -1.99
PCDHGB3Q9Y5G1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PCDHGB3Q9Y5G1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PCDHGB3Q9Y5G1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.61□□□□□ -1.99
PCDHGB3Q9Y5G1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PCDHGB3Q9Y5G1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms