Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 AL163195.1-201ENST00000496941 348 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 UBL5P1-201ENST00000507979 193 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-1098P-201ENST00000516772 96 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 RNA5SP102-201ENST00000516865 106 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 MIR4781-201ENST00000585250 76 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 PCGEM1.1-201ENST00000613431 131 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 AL049777.1-201ENST00000622740 518 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 AC019226.2-201ENST00000625973 424 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 AC006927.4-201ENST00000639187 543 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 MTND4P14-201ENST00000435799 1354 ntBASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HDGFL3Q9Y3E1 AL391994.1-201ENST00000254724 282 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 U3.4-201ENST00000363352 213 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 U3.9-201ENST00000363823 204 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 SNORA25-201ENST00000384384 134 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 HIGD1AP15-201ENST00000416198 280 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 AC132479.1-201ENST00000449160 144 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 AC007395.1-201ENST00000451333 677 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 RNU7-14P-201ENST00000459331 62 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 AC074344.1-201ENST00000512823 224 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-377P-201ENST00000515965 102 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 MIR3664-201ENST00000579074 99 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 MIR3923-201ENST00000579521 83 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 AL359999.1-201ENST00000604513 294 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 AC004492.1-201ENST00000607036 742 ntBASIC0.79□□□□□ -2.28
HDGFL3Q9Y3E1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 RNU1-76P-201ENST00000362903 159 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 RNU4-56P-201ENST00000364700 142 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 SNORD32A-201ENST00000364805 84 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 SNORA18.2-201ENST00000383865 132 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 RNU6-331P-201ENST00000384724 107 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 Y_RNA.608-201ENST00000410647 95 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 MTATP6P14-201ENST00000455189 673 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 RN7SKP88-201ENST00000516847 250 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 ZNF321P-202ENST00000550843 495 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 HMGN1P30-201ENST00000589286 268 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 VN1R107P-201ENST00000601784 209 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 AL356157.2-201ENST00000605122 111 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 RPL17P51-201ENST00000605218 238 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 CTHRC1P1-201ENST00000605383 469 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 BX284668.6-201ENST00000606899 438 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 AL353149.1-201ENST00000610667 244 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 7SK.8-201ENST00000612110 250 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 7SK.11-201ENST00000615477 250 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 AC136475.10-201ENST00000620253 385 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 7SK.13-201ENST00000622040 250 ntBASIC0.78□□□□□ -2.28
HDGFL3Q9Y3E1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 SNORD114-27-201ENST00000363766 70 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-336P-201ENST00000364891 107 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 Y_RNA.324-201ENST00000365165 102 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-45P-201ENST00000384471 107 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 RNU11-5P-201ENST00000391216 129 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 ELOCP4-201ENST00000420090 333 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 ISCA1P6-201ENST00000427740 390 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 MTND1P18-201ENST00000448191 573 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AC013470.1-201ENST00000453438 462 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 SNRPGP7-201ENST00000469016 106 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AF131216.2-201ENST00000512316 564 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AC104136.1-201ENST00000512969 394 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 RNU5F-4P-201ENST00000516581 114 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-856P-201ENST00000516959 98 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 CYCSP23-201ENST00000519781 313 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 EIF4A1P12-201ENST00000551910 141 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AC008015.1-201ENST00000555505 465 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AC090888.2-201ENST00000559765 1144 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 MIR4509-3-201ENST00000578671 94 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 MIR4509-2-201ENST00000583920 94 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AL022345.2-201ENST00000606307 135 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 MIR4509-1-201ENST00000618224 94 ntBASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
HDGFL3Q9Y3E1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-37P-201ENST00000362692 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-179P-201ENST00000363350 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-11P-201ENST00000364234 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-25P-201ENST00000383873 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-1-201ENST00000383898 107 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms