Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 MIR4765-201ENST00000585007 77 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 7SK.7-201ENST00000603504 247 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 AL355297.3-201ENST00000604082 446 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 AL137843.1-201ENST00000605078 385 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 AC005000.2-201ENST00000605468 310 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 AC096772.1-201ENST00000609146 564 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 AC009318.2-201ENST00000610917 651 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 AL021879.1-201ENST00000611756 288 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 U4.1-201ENST00000620349 87 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 MIR3651-201ENST00000630427 90 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 AC026241.1-201ENST00000517873 2142 ntBASIC3.35□□□□□ -1.87
USP25Q9UHP3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP25Q9UHP3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.34□□□□□ -1.87
USP25Q9UHP3 AL359854.1-201ENST00000614203 1594 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 MAPK10-266ENST00000641066 6555 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 SNORD50.1-201ENST00000362987 71 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 Y_RNA.106-201ENST00000363189 100 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 RNU6-336P-201ENST00000364891 107 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 RNU6-487P-201ENST00000365430 104 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 SNORA54-201ENST00000384281 123 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 Y_RNA.485-201ENST00000384395 102 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
USP25Q9UHP3 SNORA11.2-201ENST00000408318 127 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC079354.2-201ENST00000453523 154 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 BX510359.1-201ENST00000456973 237 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC117440.1-201ENST00000474107 571 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC010655.3-201ENST00000478818 450 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 RPS29P2-201ENST00000479278 136 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 RPL30P10-201ENST00000488148 337 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC006445.1-201ENST00000491925 405 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 RPL22P13-201ENST00000493291 347 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.34□□□□□ -1.87
USP25Q9UHP3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.34□□□□□ -1.87
USP25Q9UHP3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC107016.2-201ENST00000547968 190 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC004584.2-201ENST00000570407 410 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC006006.1-201ENST00000603082 144 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC090115.4-201ENST00000609970 188 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 HMGB1P24-202ENST00000615653 685 ntBASIC3.34□□□□□ -1.87
USP25Q9UHP3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.34□□□□□ -1.87
USP25Q9UHP3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.34□□□□□ -1.87
USP25Q9UHP3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.34□□□□□ -1.87
USP25Q9UHP3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.34□□□□□ -1.88
USP25Q9UHP3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP25Q9UHP3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 RNU6-227P-201ENST00000362865 103 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 RNU6-527P-201ENST00000363425 104 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 SET-203ENST00000372688 801 ntTSL 2 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 Y_RNA.424-201ENST00000384063 103 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 RNU6-784P-201ENST00000384330 106 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 AC074117.2-201ENST00000417130 397 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 DPH3P2-201ENST00000422618 250 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 RN7SL297P-201ENST00000483161 293 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 RPL23AP49-201ENST00000492925 468 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 AP002404.1-201ENST00000532005 451 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 AL161670.1-201ENST00000554348 137 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 HSBP1P1-201ENST00000555205 166 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 AC103810.1-201ENST00000579873 453 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 MIR5188-201ENST00000583467 113 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 AC019159.1-201ENST00000605094 187 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 AL121655.1-201ENST00000605811 308 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.33□□□□□ -1.88
USP25Q9UHP3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.33□□□□□ -1.88
USP25Q9UHP3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.32□□□□□ -1.88
USP25Q9UHP3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
USP25Q9UHP3 RNU6-105P-201ENST00000363909 104 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 SNORD14.1-201ENST00000365609 90 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 MT-TG-201ENST00000387429 68 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 MIR1252-201ENST00000408861 65 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP25Q9UHP3 Z98742.2-201ENST00000431564 187 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 AL591043.1-201ENST00000432461 424 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 RPS15AP7-201ENST00000439294 405 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 RPL36AP48-201ENST00000485521 314 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.32□□□□□ -1.88
USP25Q9UHP3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.32□□□□□ -1.88
USP25Q9UHP3 RNU6-911P-201ENST00000516523 104 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 RNU6-635P-201ENST00000516651 102 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 RN7SKP272-201ENST00000516988 232 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 RN7SKP57-201ENST00000517248 293 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 AC144568.1-201ENST00000520139 137 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 AC010186.2-204ENST00000537668 439 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 HSPE1P20-201ENST00000538133 289 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 VN1R91P-201ENST00000594377 169 ntBASIC3.32□□□□□ -1.88
USP25Q9UHP3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.32□□□□□ -1.88
USP25Q9UHP3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.32□□□□□ -1.88
USP25Q9UHP3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms