Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.01□□□□□ -1.93
COL20A1Q9P218 AC022493.2-201ENST00000506122 481 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 AC091874.1-201ENST00000511402 339 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.01□□□□□ -1.93
COL20A1Q9P218 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.01□□□□□ -1.93
COL20A1Q9P218 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.01□□□□□ -1.93
COL20A1Q9P218 IGHVIII-44-202ENST00000636235 289 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 AC009487.2-201ENST00000420969 6821 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
COL20A1Q9P218 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL20A1Q9P218 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL20A1Q9P218 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL20A1Q9P218 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL20A1Q9P218 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL20A1Q9P218 Y_RNA.48-201ENST00000362710 103 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 RNU6-1210P-201ENST00000363775 107 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 RNU4-9P-201ENST00000364951 139 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 SNORA67.4-201ENST00000384688 142 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 RNU6-700P-201ENST00000391043 107 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3□□□□□ -1.93
COL20A1Q9P218 TRIAP1P1-201ENST00000427062 225 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 AC005534.2-201ENST00000431047 433 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3□□□□□ -1.93
COL20A1Q9P218 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3□□□□□ -1.93
COL20A1Q9P218 AC096725.1-201ENST00000514266 313 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 RNA5SP282-201ENST00000516355 108 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3□□□□□ -1.93
COL20A1Q9P218 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3□□□□□ -1.93
COL20A1Q9P218 AL590705.4-201ENST00000532209 134 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 SUB1P3-201ENST00000564581 315 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 MIR5571-201ENST00000577998 113 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 MIR4635-201ENST00000583759 79 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 AL158827.2-201ENST00000602494 330 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 AC134503.1-201ENST00000633048 54 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 AL691447.3-201ENST00000635020 330 ntBASIC3□□□□□ -1.93
COL20A1Q9P218 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL20A1Q9P218 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
COL20A1Q9P218 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL20A1Q9P218 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.99□□□□□ -1.93
COL20A1Q9P218 Y_RNA.128-201ENST00000363391 112 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 SNORA51.4-201ENST00000364993 124 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 Y_RNA.394-201ENST00000383942 103 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 Y_RNA.395-201ENST00000383945 109 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 SNORA26.3-201ENST00000391119 136 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 AL590135.1-201ENST00000422215 156 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 AC019205.3-201ENST00000424573 156 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 MTCYBP10-201ENST00000424905 650 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
COL20A1Q9P218 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.99□□□□□ -1.93
COL20A1Q9P218 MTCYBP6-201ENST00000441810 138 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.99□□□□□ -1.93
COL20A1Q9P218 AC016700.2-201ENST00000446011 156 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 MIR2053-201ENST00000459295 91 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.99□□□□□ -1.93
COL20A1Q9P218 RPL30P10-201ENST00000488148 337 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 SRIP1-201ENST00000489235 288 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 AC015911.1-201ENST00000495111 156 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 RNU2-53P-201ENST00000516257 147 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.99□□□□□ -1.93
COL20A1Q9P218 AL353621.2-201ENST00000605340 133 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 AC005014.2-201ENST00000607795 599 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 SCARNA4-201ENST00000629045 128 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 SNORA43.4-201ENST00000629559 138 ntBASIC2.99□□□□□ -1.93
COL20A1Q9P218 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL20A1Q9P218 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
COL20A1Q9P218 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL20A1Q9P218 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
COL20A1Q9P218 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL20A1Q9P218 AC138915.1-201ENST00000565427 1685 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 MIR369-201ENST00000362155 70 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 RNU6-1159P-201ENST00000362933 107 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 SNORA29-201ENST00000384183 140 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 RNU6-301P-201ENST00000384277 107 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 AC007098.1-201ENST00000420122 367 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 EIF4EP4-201ENST00000424916 578 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.98□□□□□ -1.93
COL20A1Q9P218 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 AL353997.1-201ENST00000432936 108 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.98□□□□□ -1.93
COL20A1Q9P218 AC099799.1-201ENST00000439809 192 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 AC091179.1-201ENST00000461606 579 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 RN7SL429P-201ENST00000479090 223 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 RN7SL489P-201ENST00000486185 223 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 RN7SL327P-201ENST00000488659 223 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.98□□□□□ -1.93
COL20A1Q9P218 RNU7-175P-201ENST00000515915 61 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 RNU5F-2P-201ENST00000516066 82 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 SNORA9.3-201ENST00000516383 129 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 SCARNA3-201ENST00000517097 143 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 AC109329.2-201ENST00000519658 482 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 MRPS36P4-201ENST00000534436 298 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 RN7SL853P-201ENST00000617250 223 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 SNORD98-201ENST00000636377 67 ntBASIC2.98□□□□□ -1.93
COL20A1Q9P218 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL20A1Q9P218 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.98□□□□□ -1.93
COL20A1Q9P218 Y_RNA.445-201ENST00000384168 102 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 Y_RNA.577-201ENST00000384794 101 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 CBX3P9-201ENST00000402326 552 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 AL590004.2-201ENST00000404787 371 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 RNA5SP494-201ENST00000410653 129 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms