Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC025518.1-201ENST00000479856 347 ntBASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 GZMAP1-201ENST00000503054 631 ntBASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 AIG1P1-201ENST00000503376 148 ntBASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 SNORA70.19-201ENST00000516717 90 ntBASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 RNU6-567P-201ENST00000516746 107 ntBASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 AL049781.1-201ENST00000623195 3585 ntBASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 AL391987.6-201ENST00000305671 199 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 Y_RNA.16-201ENST00000362421 102 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 RNU4-35P-201ENST00000362588 141 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 RNU6-529P-201ENST00000363383 104 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 RNU6-137P-201ENST00000363680 108 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 SNORD115-8-201ENST00000363856 82 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 SNORD27-201ENST00000363981 72 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 SNORD115-38-201ENST00000365037 82 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 SNORA70.4-201ENST00000365509 134 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 MIR490-201ENST00000384865 128 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 MIR549A-201ENST00000385268 96 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 MRPL35P1-201ENST00000404272 572 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 snoU13.22-201ENST00000459428 104 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 RNU5F-2P-201ENST00000516066 82 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 RN7SKP49-201ENST00000516675 260 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 IGKV2-26-201ENST00000518305 343 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 AC025281.1-201ENST00000567026 265 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 RNU6-91P-201ENST00000607774 107 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.25□□□□□ -1.89
KCMF1Q9P0J7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 AC058791.1-201ENST00000608412 3198 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 RNU6-873P-201ENST00000363833 107 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 RNA5SP387-201ENST00000364226 106 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 RNA5SP72-201ENST00000364442 117 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 Y_RNA.541-201ENST00000384640 113 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 MIR329-1-201ENST00000385028 80 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 AC139712.2-201ENST00000424302 339 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 RPS4XP2-201ENST00000458402 793 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 AP001324.2-201ENST00000461163 319 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 HMGB3P17-201ENST00000504195 649 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 PHBP14-201ENST00000512887 367 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 MIR3136-201ENST00000583498 78 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 AL391813.1-201ENST00000603098 260 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 ZNF204P-201ENST00000416749 2397 ntBASIC3.24□□□□□ -1.89
KCMF1Q9P0J7 AL513302.2-201ENST00000562313 1842 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 Y_RNA.40-201ENST00000362645 93 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 SNORD114-19-201ENST00000363072 75 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 RNU4-56P-201ENST00000364700 142 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 Y_RNA.478-201ENST00000384358 107 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 RNU6-1026P-201ENST00000384465 108 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 RNU6-102P-201ENST00000384485 104 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 MIR34B-201ENST00000385076 84 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 MIR23A-201ENST00000385245 73 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 Y_RNA.581-201ENST00000391017 97 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 MIR208B-201ENST00000401172 77 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 MIR548H3-201ENST00000408771 118 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 RPS26P42-201ENST00000413485 326 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 CYCSP48-201ENST00000417124 323 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 AC005002.2-201ENST00000438228 269 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms