Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TMEM39AQ9NV64 AL365361.1-201ENST00000566942 3481 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 MTND5P35-201ENST00000557537 1720 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 RNA5SP197-201ENST00000363357 119 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 Y_RNA.179-201ENST00000363844 90 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 SNORA72.2-201ENST00000365028 127 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 Y_RNA.506-201ENST00000384494 102 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 RNU6-125P-201ENST00000384505 107 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 SNORA1.3-201ENST00000384676 136 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AL591034.1-201ENST00000407447 340 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 RN7SKP53-201ENST00000411337 315 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 RPL23AP82-202ENST00000427528 469 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AL161651.1-201ENST00000440882 223 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AC007395.1-201ENST00000451333 677 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 snoU13.28-201ENST00000459235 104 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 RNA5SP208-201ENST00000516156 78 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AC055872.1-201ENST00000570978 278 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 HSPE1P7-201ENST00000604681 321 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AL137843.1-201ENST00000605078 385 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AC022441.3-201ENST00000605737 136 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 AL109809.4-201ENST00000603520 2185 ntBASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.01□□□□□ -1.77
TMEM39AQ9NV64 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TMEM39AQ9NV64 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4□□□□□ -1.77
TMEM39AQ9NV64 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4□□□□□ -1.77
TMEM39AQ9NV64 AC004944.1-201ENST00000517807 3059 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4□□□□□ -1.77
TMEM39AQ9NV64 RNU4-35P-201ENST00000362588 141 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 MIR549A-201ENST00000385268 96 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 EI24P2-201ENST00000397776 1076 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 RNU6-1140P-201ENST00000410517 106 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4□□□□□ -1.77
TMEM39AQ9NV64 UQCRBP2-201ENST00000447827 297 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4□□□□□ -1.77
TMEM39AQ9NV64 AC005042.3-201ENST00000453230 174 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4□□□□□ -1.77
TMEM39AQ9NV64 RNU6-625P-201ENST00000459412 107 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 CYCSP23-201ENST00000519781 313 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4□□□□□ -1.77
TMEM39AQ9NV64 AC115990.1-201ENST00000526957 301 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4□□□□□ -1.77
TMEM39AQ9NV64 AC018448.1-201ENST00000552843 316 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 CYP4A43P-201ENST00000568156 121 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 MZT1P2-201ENST00000604387 248 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TMEM39AQ9NV64 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
TMEM39AQ9NV64 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
TMEM39AQ9NV64 AC002543.1-201ENST00000299783 1954 ntBASIC4□□□□□ -1.77
TMEM39AQ9NV64 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 AC007215.1-201ENST00000464893 276 ntBASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 UBE2DNL-203ENST00000474922 222 ntBASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 AC074133.1-201ENST00000515696 183 ntBASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 Y_RNA.662-201ENST00000516028 97 ntBASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 RNU6-1278P-201ENST00000516130 107 ntBASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 AC008011.1-201ENST00000545989 227 ntBASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 MIR7112-201ENST00000616126 65 ntBASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMEM39AQ9NV64 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 Y_RNA.498-201ENST00000384460 102 ntBASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 SNORD98-201ENST00000636377 67 ntBASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 BX322639.1-202ENST00000423987 2213 ntBASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TMEM39AQ9NV64 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms