Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 Y_RNA.708-201ENST00000516950 96 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 CYP4A27P-201ENST00000567218 190 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC011494.1-201ENST00000596454 237 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AL356575.1-201ENST00000603008 283 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC016727.1-205ENST00000605437 569 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.804-201ENST00000615262 101 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC069528.2-201ENST00000624849 1991 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 MTND5P9-201ENST00000503854 1755 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC233981.2-201ENST00000611524 1614 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AC131280.1-202ENST00000624067 4211 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 SNORA29-201ENST00000384183 140 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-842P-201ENST00000384269 107 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-443P-201ENST00000384780 107 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.594-201ENST00000410373 140 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 RNU4-14P-201ENST00000410858 122 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 HMGB3P2-201ENST00000411913 584 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AC012306.1-201ENST00000423267 114 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.670-201ENST00000516255 105 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-277P-201ENST00000516272 106 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 SNORA31.15-201ENST00000516771 132 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 MRPS36P4-201ENST00000534436 298 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 MIR3923-201ENST00000579521 83 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 MIR3670-2-201ENST00000582974 65 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 MIR3670-1-201ENST00000584160 65 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 MIR3670-3-201ENST00000584855 65 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AL355297.2-201ENST00000604792 129 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 LARP7P1-201ENST00000605576 316 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AP000654.2-201ENST00000605633 586 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 MIR3670-4-201ENST00000612260 65 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 HMGB1P24-202ENST00000615653 685 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 U4atac.1-201ENST00000618345 95 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AC098657.3-201ENST00000620434 263 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 MIR1302-1-201ENST00000637932 143 ntBASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.45□□□□□ -2.02
SLC6A13Q9NSD5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 RNU5B-2P-201ENST00000363036 113 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 MTCYBP2-201ENST00000407745 171 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 RNA5SP201-201ENST00000410316 124 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-1050P-201ENST00000410388 107 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 AC145146.1-201ENST00000496370 254 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 AC021146.2-201ENST00000504736 556 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 AC005741.1-201ENST00000511094 432 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 RN7SKP132-201ENST00000516001 208 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 CBX3P7-201ENST00000532876 502 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 MIR5696-201ENST00000578474 85 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 MIR4273-201ENST00000582824 84 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 AC010297.1-201ENST00000623948 149 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 KPNA2P1-201ENST00000458289 1591 ntBASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SLC6A13Q9NSD5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-867P-201ENST00000364956 107 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 DEFA7P-201ENST00000382676 285 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 SNORA46.1-201ENST00000391069 153 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 AL353705.4-201ENST00000449661 238 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 FO393415.2-201ENST00000480085 343 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 SRIP1-201ENST00000489235 288 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 AC018630.3-201ENST00000542637 96 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 RPS3AP23-202ENST00000574601 686 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 MIR4298-201ENST00000584380 73 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 AC009229.3-201ENST00000608056 282 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 AC005520.5-201ENST00000613926 164 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 PISRT1.1-201ENST00000616930 107 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 AL359757.2-201ENST00000624309 274 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 SCARNA4-201ENST00000629045 128 ntBASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SLC6A13Q9NSD5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-944P-201ENST00000364023 107 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms