Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 Y_RNA.387-201ENST00000383918 102 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 RNU6-601P-201ENST00000384540 107 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
DDX4Q9NQI0 AL513475.1-201ENST00000406602 315 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.65□□□□□ -1.99
DDX4Q9NQI0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
DDX4Q9NQI0 AC004383.1-201ENST00000438135 289 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
DDX4Q9NQI0 AP001324.2-201ENST00000461163 319 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 RPS27AP9-201ENST00000477681 438 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 RNU6-277P-201ENST00000516272 106 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 AC109329.1-201ENST00000518744 317 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 AP005902.1-201ENST00000521358 186 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.65□□□□□ -1.99
DDX4Q9NQI0 AC105137.2-201ENST00000569073 466 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 POLR3GP2-201ENST00000588366 668 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 AL356280.1-201ENST00000603614 379 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 AC007792.1-201ENST00000623023 402 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.65□□□□□ -1.99
DDX4Q9NQI0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
DDX4Q9NQI0 AL359854.1-201ENST00000614203 1594 ntBASIC2.65□□□□□ -1.99
DDX4Q9NQI0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
DDX4Q9NQI0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
DDX4Q9NQI0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
DDX4Q9NQI0 AC010329.5-201ENST00000623497 2174 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.64□□□□□ -1.99
DDX4Q9NQI0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.64□□□□□ -1.99
DDX4Q9NQI0 RNU6-1010P-201ENST00000362757 107 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 Y_RNA.151-201ENST00000363566 112 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 RNU6-1222P-201ENST00000384615 107 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 BTF3L4P2-201ENST00000392798 346 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 AC003685.2-201ENST00000422795 395 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.64□□□□□ -1.99
DDX4Q9NQI0 AC243964.1-201ENST00000441814 261 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.64□□□□□ -1.99
DDX4Q9NQI0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.64□□□□□ -1.99
DDX4Q9NQI0 SNORD5.1-201ENST00000458800 75 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 ACA59.1-201ENST00000515966 143 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.64□□□□□ -1.99
DDX4Q9NQI0 AC078795.3-201ENST00000602913 472 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 AP001836.1-201ENST00000604675 523 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 MIR8076-201ENST00000611401 83 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 AC097372.5-201ENST00000623665 376 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 AL359697.1-201ENST00000624879 587 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 AC112487.2-201ENST00000637950 304 ntBASIC2.64□□□□□ -1.99
DDX4Q9NQI0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
DDX4Q9NQI0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
DDX4Q9NQI0 SNORD114-19-201ENST00000363072 75 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 RNU4-73P-201ENST00000363164 141 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 RNU1-138P-201ENST00000384093 164 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 RNU6-443P-201ENST00000384780 107 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AC138623.1-201ENST00000418060 216 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AL133396.1-201ENST00000432048 687 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.63□□□□□ -1.99
DDX4Q9NQI0 MTND4P17-201ENST00000470444 350 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 PTP4A1P4-201ENST00000512479 322 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 RNA5SP112-201ENST00000515937 99 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AL355375.2-201ENST00000574825 175 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 MIR4524B-201ENST00000581569 115 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AC018462.2-201ENST00000605375 395 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AL449363.1-201ENST00000617815 186 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AC098657.3-201ENST00000620434 263 ntBASIC2.63□□□□□ -1.99
DDX4Q9NQI0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
DDX4Q9NQI0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.63□□□□□ -1.99
DDX4Q9NQI0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
DDX4Q9NQI0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 RNU6-1141P-201ENST00000364520 107 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 SNORA67.1-201ENST00000364749 141 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 RNU6-596P-201ENST00000365395 98 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 RNU6-1297P-201ENST00000384415 104 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 RNU2-23P-201ENST00000410545 195 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 CYCSP48-201ENST00000417124 323 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 MTND3P23-201ENST00000431980 347 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 AC236972.2-201ENST00000434979 310 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 RPL36AP48-201ENST00000485521 314 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 RNU6-559P-201ENST00000516151 98 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 RNU1-104P-201ENST00000517280 175 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 AC115990.1-201ENST00000526957 301 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 AC079598.5-201ENST00000547460 117 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 MIR4769-201ENST00000584126 77 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 MIR4765-201ENST00000585007 77 ntBASIC2.62□□□□□ -1.99
DDX4Q9NQI0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.62□□□□□ -1.99
DDX4Q9NQI0 C8orf59P2-201ENST00000603441 271 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms