Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.74□□□□□ -1.81
SSU72Q9NP77 AC114781.5-201ENST00000615297 108 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 AC091953.5-201ENST00000622919 233 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SSU72Q9NP77 TNPO1P3-201ENST00000436471 2662 ntBASIC3.74□□□□□ -1.81
SSU72Q9NP77 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SSU72Q9NP77 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SSU72Q9NP77 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSU72Q9NP77 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.73□□□□□ -1.81
SSU72Q9NP77 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
SSU72Q9NP77 Y_RNA.182-201ENST00000363880 111 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 RNA5SP42-201ENST00000364278 115 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 Y_RNA.343-201ENST00000365354 112 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 MIR569-201ENST00000385228 96 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SSU72Q9NP77 RNU6-381P-201ENST00000391259 108 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 RNA5SP504-201ENST00000410676 117 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 AC245028.1-201ENST00000423259 256 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 AL591419.1-201ENST00000427423 339 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 HMGN2P20-201ENST00000437531 273 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 AL714022.1-201ENST00000439897 151 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.73□□□□□ -1.81
SSU72Q9NP77 AC006539.3-201ENST00000454258 129 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 HMGN2P16-201ENST00000456802 261 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 RN7SL132P-201ENST00000478131 296 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.73□□□□□ -1.81
SSU72Q9NP77 RNU6-426P-201ENST00000516464 97 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 DEFB131C-201ENST00000528817 165 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 MIR3923-201ENST00000579521 83 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 AL365222.1-201ENST00000614661 98 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 AL391261.4-201ENST00000616012 481 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.73□□□□□ -1.81
SSU72Q9NP77 AL034408.1-202ENST00000636088 415 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 MIR3199-2-201ENST00000636243 86 ntBASIC3.73□□□□□ -1.81
SSU72Q9NP77 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.73□□□□□ -1.81
SSU72Q9NP77 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SSU72Q9NP77 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.73□□□□□ -1.81
SSU72Q9NP77 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSU72Q9NP77 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSU72Q9NP77 RNU4-17P-201ENST00000365598 141 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 SNORA26.5-201ENST00000391215 123 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 MIR1183-201ENST00000408856 89 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 RNU6-257P-201ENST00000410238 98 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 CRYBB2P1-203ENST00000415709 538 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 AIMP1P2-201ENST00000425294 312 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 AL691449.1-201ENST00000426570 421 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 snoU13.28-201ENST00000459235 104 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 AC146507.2-201ENST00000460608 476 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 AC005840.1-201ENST00000498412 377 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSU72Q9NP77 RNU7-121P-201ENST00000516604 62 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 AP003730.1-201ENST00000524605 285 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.72□□□□□ -1.81
SSU72Q9NP77 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 MIR3609-201ENST00000582661 80 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 PCGEM1.1-201ENST00000613431 131 ntBASIC3.72□□□□□ -1.81
SSU72Q9NP77 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSU72Q9NP77 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.72□□□□□ -1.81
SSU72Q9NP77 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSU72Q9NP77 RNU4-15P-201ENST00000362613 141 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 Y_RNA.81-201ENST00000362997 102 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 snoU2_19.4-201ENST00000364329 80 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 RNU6-1264P-201ENST00000383891 107 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 RNU6-1168P-201ENST00000390831 104 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 RNU6-1248P-201ENST00000391096 64 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 AL645939.1-201ENST00000453429 797 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 S100A11P1-201ENST00000477525 312 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 AC009127.3-201ENST00000570531 403 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 IPO5P1-202ENST00000600039 287 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 SNRPGP20-201ENST00000604477 205 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 AL034555.1-201ENST00000604816 211 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 AL078604.3-201ENST00000615580 211 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 Y_RNA.778-201ENST00000620203 90 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 AC073308.1-201ENST00000623696 305 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 AC018692.3-201ENST00000623929 123 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSU72Q9NP77 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSU72Q9NP77 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.71□□□□□ -1.82
SSU72Q9NP77 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSU72Q9NP77 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.71□□□□□ -1.82
SSU72Q9NP77 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSU72Q9NP77 CUL1P1-201ENST00000509510 2425 ntBASIC3.71□□□□□ -1.82
SSU72Q9NP77 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
SSU72Q9NP77 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
SSU72Q9NP77 AC100821.1-201ENST00000523153 2479 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSU72Q9NP77 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSU72Q9NP77 AL133412.1-201ENST00000380194 2992 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
SSU72Q9NP77 PWAR6-201ENST00000552334 4618 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.7□□□□□ -1.82
SSU72Q9NP77 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSU72Q9NP77 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSU72Q9NP77 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSU72Q9NP77 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSU72Q9NP77 SNORD87-201ENST00000364849 89 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 RNU6-275P-201ENST00000364910 107 ntBASIC3.7□□□□□ -1.82
SSU72Q9NP77 RNA5SP97-201ENST00000365006 84 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms