Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.78□□□□□ -1.96
CDT1Q9H211 RNU6-1309P-201ENST00000363305 108 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 RNY3P11-201ENST00000364153 102 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 RNU6-1317P-201ENST00000364582 104 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 FO393413.1-201ENST00000402892 195 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.78□□□□□ -1.96
CDT1Q9H211 RPS15AP10-201ENST00000432472 382 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 MTND5P22-201ENST00000458380 195 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 RPL9P9-202ENST00000466501 579 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 MED28P2-201ENST00000475771 317 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 AC022447.4-201ENST00000504053 364 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 SNORD19.2-201ENST00000516978 73 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 COX6CP5-201ENST00000527162 228 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 CBX3P8-201ENST00000532412 525 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 AC027176.1-201ENST00000560204 514 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 AC109446.1-201ENST00000566172 220 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 AC009163.5-201ENST00000575421 637 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 SNORD58B-201ENST00000607313 66 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 UCA1.1-201ENST00000620952 75 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.78□□□□□ -1.96
CDT1Q9H211 AC026241.1-201ENST00000517873 2142 ntBASIC2.78□□□□□ -1.96
CDT1Q9H211 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.78□□□□□ -1.96
CDT1Q9H211 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.78□□□□□ -1.96
CDT1Q9H211 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CDT1Q9H211 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
CDT1Q9H211 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDT1Q9H211 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.77□□□□□ -1.97
CDT1Q9H211 SNORD56.1-201ENST00000362913 68 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 RNU6-490P-201ENST00000362985 107 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 Y_RNA.144-201ENST00000363521 113 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 Y_RNA.158-201ENST00000363651 101 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 RNU6-105P-201ENST00000363909 104 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 RNU6-1180P-201ENST00000364935 107 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 RNU6-19P-201ENST00000384718 107 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 MIR518C-201ENST00000384822 101 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 MIR27B-201ENST00000385129 97 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDT1Q9H211 AL139095.1-201ENST00000404326 391 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 HMGB3P2-201ENST00000411913 584 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 AC096649.2-201ENST00000416186 393 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 AC074117.2-201ENST00000417130 397 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 PTGES3P4-201ENST00000426243 356 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDT1Q9H211 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.77□□□□□ -1.97
CDT1Q9H211 AC105758.1-201ENST00000506038 399 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.77□□□□□ -1.97
CDT1Q9H211 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.77□□□□□ -1.97
CDT1Q9H211 AL158827.2-201ENST00000602494 330 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 AL691447.3-201ENST00000635020 330 ntBASIC2.77□□□□□ -1.97
CDT1Q9H211 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
CDT1Q9H211 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDT1Q9H211 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CDT1Q9H211 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDT1Q9H211 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CDT1Q9H211 RNU4-82P-201ENST00000362443 140 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 Y_RNA.364-201ENST00000365532 101 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 RNU6-790P-201ENST00000384479 105 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 RPL21P75-201ENST00000396599 483 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 RPL21P28-201ENST00000401418 483 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 RPS29P13-201ENST00000402041 169 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 RNU6-293P-201ENST00000411259 106 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC009963.1-201ENST00000417265 157 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC096644.2-201ENST00000429278 159 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AL591043.1-201ENST00000432461 424 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AL353997.1-201ENST00000432936 108 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC004383.1-201ENST00000438135 289 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.76□□□□□ -1.97
CDT1Q9H211 IPO7P1-201ENST00000442031 636 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC009296.1-201ENST00000443146 155 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 RPL21P39-201ENST00000463605 483 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC087190.1-201ENST00000484462 480 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC068781.1-201ENST00000488231 618 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC093591.1-201ENST00000491435 481 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 RPL21P16-201ENST00000495531 483 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.76□□□□□ -1.97
CDT1Q9H211 SNORA25.10-201ENST00000515926 124 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 RNU4-77P-201ENST00000516692 156 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 SNORA31.23-201ENST00000517219 133 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 CKS1BP7-201ENST00000522230 235 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC010186.2-204ENST00000537668 439 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.76□□□□□ -1.97
CDT1Q9H211 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.76□□□□□ -1.97
CDT1Q9H211 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.76□□□□□ -1.97
CDT1Q9H211 MIR4503-201ENST00000582187 83 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC092447.9-201ENST00000603395 144 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AP000942.4-201ENST00000604811 241 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AC133104.2-201ENST00000615272 193 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AL162373.1-201ENST00000620433 407 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 AL078596.1-201ENST00000624856 447 ntBASIC2.76□□□□□ -1.97
CDT1Q9H211 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.76□□□□□ -1.97
CDT1Q9H211 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDT1Q9H211 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDT1Q9H211 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.75□□□□□ -1.97
CDT1Q9H211 RNU6-99P-201ENST00000364721 107 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 U8.8-201ENST00000365399 135 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 Y_RNA.533-201ENST00000384596 114 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 SNORA41-201ENST00000384675 132 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms