Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 AC027309.3-201ENST00000623419 351 ntBASIC3.02□□□□□ -1.93
SH2D3AQ9BRG2 AC090617.7-201ENST00000623952 126 ntBASIC3.02□□□□□ -1.93
SH2D3AQ9BRG2 AC243829.7-201ENST00000633081 225 ntBASIC3.02□□□□□ -1.93
SH2D3AQ9BRG2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SH2D3AQ9BRG2 AC022336.2-201ENST00000568966 2538 ntBASIC3.02□□□□□ -1.93
SH2D3AQ9BRG2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.02□□□□□ -1.93
SH2D3AQ9BRG2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SH2D3AQ9BRG2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SH2D3AQ9BRG2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 RNU4-50P-201ENST00000364361 141 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 Y_RNA.288-201ENST00000364854 92 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 Z98749.2-208ENST00000381646 500 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-708P-201ENST00000384217 107 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-72P-201ENST00000384285 79 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 RN7SKP123-201ENST00000410732 291 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 RNA5SP21-201ENST00000410917 96 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 RNA5SP184-201ENST00000411071 108 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 snoU109.2-201ENST00000459316 135 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 RPL23AP94-201ENST00000512518 302 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 Y_RNA.680-201ENST00000516441 93 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 SNORA31.21-201ENST00000517180 77 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 AC090517.1-201ENST00000569307 266 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 AC104581.2-201ENST00000572227 430 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 AC005357.1-201ENST00000588399 301 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 U6.99-201ENST00000637524 83 ntBASIC3.01□□□□□ -1.93
SH2D3AQ9BRG2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 AL136360.1-201ENST00000503377 1900 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-428P-201ENST00000362942 107 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-778P-201ENST00000363269 103 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-770P-201ENST00000363929 105 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-336P-201ENST00000364891 107 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 Y_RNA.376-201ENST00000365638 108 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 Y_RNA.489-201ENST00000384410 101 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 MIR521-1-201ENST00000384902 87 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 MIR518D-201ENST00000385014 87 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 SNORA69.1-201ENST00000390904 137 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNA5SP494-201ENST00000410653 129 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 AC007098.1-201ENST00000420122 367 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 USP9YP16-201ENST00000430287 407 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 USP9YP23-201ENST00000455085 407 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-1132P-201ENST00000459214 107 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-397P-201ENST00000516226 104 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-388P-201ENST00000517012 105 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-389P-201ENST00000517048 105 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-1183P-201ENST00000517054 60 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-897P-201ENST00000517135 105 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 MTND4LP5-201ENST00000605152 292 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 DLEU2_6.1-201ENST00000610536 112 ntBASIC3□□□□□ -1.93
SH2D3AQ9BRG2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3□□□□□ -1.93
SH2D3AQ9BRG2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-227P-201ENST00000362865 103 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-78P-201ENST00000362897 107 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 Y_RNA.350-201ENST00000365409 98 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 Y_RNA.461-201ENST00000384263 103 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 Y_RNA.483-201ENST00000384380 101 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 MIR196B-201ENST00000384852 84 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-700P-201ENST00000391043 107 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 RNU1-101P-201ENST00000391171 127 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-130P-201ENST00000411112 103 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 RNU2-64P-201ENST00000411315 191 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 AP000275.1-201ENST00000411943 390 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 AC063976.3-201ENST00000426849 329 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 MTATP6P7-201ENST00000453315 681 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 RN7SKP210-201ENST00000459176 261 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 MIR4782-201ENST00000577987 79 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 AC004832.5-201ENST00000608677 401 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 SCARNA4-202ENST00000625402 129 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 AC010615.1-201ENST00000594254 1764 ntBASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SH2D3AQ9BRG2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SH2D3AQ9BRG2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
SH2D3AQ9BRG2 OR56A5-201ENST00000340110 738 ntBASIC2.98□□□□□ -1.93
SH2D3AQ9BRG2 RNU6-942P-201ENST00000363002 107 ntBASIC2.98□□□□□ -1.93
SH2D3AQ9BRG2 Y_RNA.183-201ENST00000363882 113 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms