Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 VN1R87P-201ENST00000596706 487 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 AL513534.2-201ENST00000603836 250 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 AC097065.2-201ENST00000608159 533 ntBASIC0.08□□□□□ -2.4
VPS25Q9BRG1 MIR103A1-201ENST00000362165 78 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 RNU6-392P-201ENST00000364926 101 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 RNU6-1235P-201ENST00000384559 107 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
VPS25Q9BRG1 MIR1284-201ENST00000408337 120 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.07□□□□□ -2.4
VPS25Q9BRG1 AC244098.3-201ENST00000424803 96 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS25Q9BRG1 AC007395.1-201ENST00000451333 677 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.07□□□□□ -2.4
VPS25Q9BRG1 RNU7-90P-201ENST00000459216 62 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 RNU6-498P-201ENST00000459468 107 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 HMGB1P29-201ENST00000505659 499 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS25Q9BRG1 RNU1-86P-201ENST00000516108 154 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 RNU1-107P-201ENST00000516617 154 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 AC087883.1-201ENST00000551882 391 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.07□□□□□ -2.4
VPS25Q9BRG1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.07□□□□□ -2.4
VPS25Q9BRG1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.07□□□□□ -2.4
VPS25Q9BRG1 MIR4778-201ENST00000577635 80 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 Z98751.3-201ENST00000604447 521 ntBASIC0.07□□□□□ -2.4
VPS25Q9BRG1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
VPS25Q9BRG1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.07□□□□□ -2.4
VPS25Q9BRG1 RNU6-545P-201ENST00000362681 104 ntBASIC0.06□□□□□ -2.4
VPS25Q9BRG1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.06□□□□□ -2.4
VPS25Q9BRG1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
VPS25Q9BRG1 MTCYBP2-201ENST00000407745 171 ntBASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AL031779.1-201ENST00000415663 330 ntBASIC0.06□□□□□ -2.4
VPS25Q9BRG1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AL133217.1-201ENST00000450980 425 ntBASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.06□□□□□ -2.4
VPS25Q9BRG1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.06□□□□□ -2.4
VPS25Q9BRG1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
VPS25Q9BRG1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AC015712.3-201ENST00000559380 164 ntBASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AL390123.1-201ENST00000603216 237 ntBASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AP000942.3-201ENST00000603702 160 ntBASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AL353149.1-201ENST00000610667 244 ntBASIC0.06□□□□□ -2.4
VPS25Q9BRG1 AC026585.1-201ENST00000619582 524 ntBASIC0.06□□□□□ -2.4
VPS25Q9BRG1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.05□□□□□ -2.4
VPS25Q9BRG1 RNU6-527P-201ENST00000363425 104 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 RNY3P13-201ENST00000365542 102 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS25Q9BRG1 HIGD1AP15-201ENST00000416198 280 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AL590135.1-201ENST00000422215 156 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AC019205.3-201ENST00000424573 156 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 RPL23AP30-201ENST00000432419 501 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AC016700.2-201ENST00000446011 156 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS25Q9BRG1 TPRKBP1-201ENST00000456243 481 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
VPS25Q9BRG1 snoU13.25-201ENST00000458945 104 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AC015911.1-201ENST00000495111 156 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AK3P2-201ENST00000507976 429 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AC023827.1-201ENST00000569247 97 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AL353778.1-201ENST00000603149 408 ntBASIC0.05□□□□□ -2.4
VPS25Q9BRG1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.05□□□□□ -2.4
VPS25Q9BRG1 RNU5E-6P-201ENST00000365574 115 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 RNU6-142P-201ENST00000384019 107 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 RNU6-1026P-201ENST00000384465 108 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 RNA5SP467-201ENST00000391274 118 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 RNA5SP201-201ENST00000410316 124 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS25Q9BRG1 MTND4P20-201ENST00000424125 869 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 CALM2P2-201ENST00000428512 440 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AL121890.1-201ENST00000435457 205 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 MTCYBP39-201ENST00000437562 491 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 HMGN2P34-201ENST00000437647 269 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS25Q9BRG1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS25Q9BRG1 MTND2P3-201ENST00000452458 470 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AC006026.2-201ENST00000457376 180 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 SNRPFP3-201ENST00000457792 225 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 snoU13.23-201ENST00000458863 104 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AL049829.1-201ENST00000465411 156 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AC025465.4-201ENST00000513422 638 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS25Q9BRG1 RNU6-334P-201ENST00000517072 102 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AC027419.1-201ENST00000522976 328 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AC115990.1-201ENST00000526957 301 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 DEFB130C-202ENST00000530001 230 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
VPS25Q9BRG1 MIR548AC-201ENST00000585049 88 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 FAM106DP-201ENST00000586416 501 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AL158032.1-201ENST00000605401 106 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 AC108747.1-201ENST00000609508 535 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 U6.42-201ENST00000618440 107 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms